RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 TRIM5Q9C035 493 aa22.84■■□□□ 1.25
CDH5-202ENST00000539168 SV2BQ7L1I2 683 aa22.83■■□□□ 1.24
CDH5-202ENST00000539168 LENG9Q96B70 501 aa22.83■■□□□ 1.24
CDH5-202ENST00000539168 ATG4CQ96DT6 458 aa22.83■■□□□ 1.24
CDH5-202ENST00000539168 C7orf25Q9BPX7 421 aa22.83■■□□□ 1.24
CDH5-202ENST00000539168 RBBP6Q7Z6E9 1792 aaKnown RBP22.82■■□□□ 1.24
CDH5-202ENST00000539168 POTEMA6NI47 508 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 FAM86B1E9PN63 330 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 RPN1P04843 607 aaKnown RBP22.82■■□□□ 1.24
CDH5-202ENST00000539168 TPM3P06753 285 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 FAM86B2P0C5J1 330 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 TAL1P17542 331 aaPredicted RBP22.82■■□□□ 1.24
CDH5-202ENST00000539168 DGKZQ13574 1117 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 NIPA1Q7RTP0 329 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 PROCA1Q8NCQ7 364 aaPredicted RBP22.82■■□□□ 1.24
CDH5-202ENST00000539168 ENOX1Q8TC92 643 aaKnown RBP22.82■■□□□ 1.24
CDH5-202ENST00000539168 TBC1D5Q92609 795 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 MTRQ99707 1265 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 RPTORQ8N122 1335 aa22.82■■□□□ 1.24
CDH5-202ENST00000539168 PTMAP06454 111 aaKnown RBP22.81■■□□□ 1.24
CDH5-202ENST00000539168 BMP6P22004 513 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 CDC25BP30305 580 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 PPP1R2P41236 205 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 GRB10Q13322 594 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 CUL4BQ13620 913 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 TMEM119Q4V9L6 283 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 CEP55Q53EZ4 464 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 ZNF658Q5TYW1 1059 aaPredicted RBP22.81■■□□□ 1.24
CDH5-202ENST00000539168 PLA2G4DQ86XP0 818 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 REPS2Q8NFH8 660 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 TRERF1Q96PN7 1200 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 SMCHD1A6NHR9 2005 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 IGLV3-22A0A075B6J6 115 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 SPDYE5A6NIY4 337 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 ZNF75DP51815 510 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 TTLL12Q14166 644 aaPredicted RBP22.81■■□□□ 1.24
CDH5-202ENST00000539168 NCAPHQ15003 741 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 EAPPQ56P03 285 aaPredicted RBP22.81■■□□□ 1.24
CDH5-202ENST00000539168 MB21D1Q8N884 522 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 LARP4BQ92615 738 aaKnown RBP22.81■■□□□ 1.24
CDH5-202ENST00000539168 MRFAP1L1Q96HT8 127 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 TEX13BQ9BXU2 312 aa22.81■■□□□ 1.24
CDH5-202ENST00000539168 OTOFQ9HC10 1997 aa22.8■■□□□ 1.24
CDH5-202ENST00000539168 NFIBO00712 420 aa22.8■■□□□ 1.24
CDH5-202ENST00000539168 MSH4O15457 936 aa22.8■■□□□ 1.24
CDH5-202ENST00000539168 BCRP11274 1271 aa22.8■■□□□ 1.24
CDH5-202ENST00000539168 XRRA1Q6P2D8 792 aa22.8■■□□□ 1.24
CDH5-202ENST00000539168 PNMA5Q96PV4 448 aa22.8■■□□□ 1.24
CDH5-202ENST00000539168 BLZF1Q9H2G9 400 aa22.8■■□□□ 1.24
CDH5-202ENST00000539168 FRMPD4Q14CM0 1322 aa22.79■■□□□ 1.24
CDH5-202ENST00000539168 RLFQ13129 1914 aa22.79■■□□□ 1.24
CDH5-202ENST00000539168 CCT6AP40227 531 aaKnown RBP22.79■■□□□ 1.24
CDH5-202ENST00000539168 PPIL2Q13356 520 aa22.79■■□□□ 1.24
CDH5-202ENST00000539168 CNNM4Q6P4Q7 775 aa22.79■■□□□ 1.24
CDH5-202ENST00000539168 RNF207Q6ZRF8 634 aa22.79■■□□□ 1.24
CDH5-202ENST00000539168 RAD54LQ92698 747 aa22.79■■□□□ 1.24
CDH5-202ENST00000539168 STAMQ92783 540 aa22.79■■□□□ 1.24
CDH5-202ENST00000539168 RNF146Q9NTX7 359 aa22.79■■□□□ 1.24
CDH5-202ENST00000539168 A0A0G2JLL6 359 aaPredicted RBP22.78■■□□□ 1.24
CDH5-202ENST00000539168 MEIS1O00470 390 aa22.78■■□□□ 1.24
CDH5-202ENST00000539168 AP5Z1O43299 807 aa22.78■■□□□ 1.24
CDH5-202ENST00000539168 STIM1Q13586 685 aa22.78■■□□□ 1.24
CDH5-202ENST00000539168 PCNX4Q63HM2 1172 aa22.78■■□□□ 1.24
CDH5-202ENST00000539168 PRRT2Q7Z6L0 340 aaPredicted RBP22.78■■□□□ 1.24
CDH5-202ENST00000539168 SYTL5Q8TDW5 730 aaPredicted RBP22.78■■□□□ 1.24
CDH5-202ENST00000539168 PLIN2Q99541 437 aa22.78■■□□□ 1.24
CDH5-202ENST00000539168 WDR11Q9BZH6 1224 aa22.78■■□□□ 1.24
CDH5-202ENST00000539168 TRIM9Q9C026 710 aa22.78■■□□□ 1.24
CDH5-202ENST00000539168 RHOBTB3O94955 611 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 SNRNP48Q6IEG0 339 aaKnown RBP22.77■■□□□ 1.24
CDH5-202ENST00000539168 SLC5A5Q92911 643 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 MXRA8Q9BRK3 442 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 ELP3Q9H9T3 547 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 BMP2KQ9NSY1 1161 aaPredicted RBP22.77■■□□□ 1.24
CDH5-202ENST00000539168 ZNF214Q9UL59 606 aaPredicted RBP22.77■■□□□ 1.24
CDH5-202ENST00000539168 KCNH4Q9UQ05 1017 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 PVALEFA0A1B0GWK0 134 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 MUTP22033 750 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 RPS6P62753 249 aaKnown RBP22.77■■□□□ 1.24
CDH5-202ENST00000539168 SPIRE1Q08AE8 756 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 PABPC4Q13310 644 aaKnown RBP eCLIP22.77■■□□□ 1.24
CDH5-202ENST00000539168 MUM1L1Q5H9M0 696 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 BLOC1S4Q9NUP1 217 aa22.77■■□□□ 1.24
CDH5-202ENST00000539168 PTPRFP10586 1907 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 LOC285556D6RIA3 1793 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 SPDYE16A6NNV3 312 aaPredicted RBP22.76■■□□□ 1.23
CDH5-202ENST00000539168 POTECB2RU33 542 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 CBFA2T2O43439 604 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 RPA1P27694 616 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 CASP1P29466 404 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 FASTKD5Q7L8L6 764 aaKnown RBP22.76■■□□□ 1.23
CDH5-202ENST00000539168 CHST13Q8NET6 341 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 RIT2Q99578 217 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 POLR3CQ9BUI4 534 aaPredicted RBP22.76■■□□□ 1.23
CDH5-202ENST00000539168 ACAD9Q9H845 621 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 HOMER2Q9NSB8 354 aa22.76■■□□□ 1.23
CDH5-202ENST00000539168 STAT3P40763 770 aa22.75■■□□□ 1.23
CDH5-202ENST00000539168 PPP2R5CQ13362 524 aa22.75■■□□□ 1.23
CDH5-202ENST00000539168 LRCH2Q5VUJ6 765 aa22.75■■□□□ 1.23
CDH5-202ENST00000539168 EXOC1Q9NV70 894 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms