RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 GUCD1Q96NT3 240 aa11.18□□□□□ -0.62
SSBP3-215ENST00000533946 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
SSBP3-215ENST00000533946 TTYH1Q9H313 450 aaPredicted RBP11.18□□□□□ -0.62
SSBP3-215ENST00000533946 RTEL1Q9NZ71 1219 aa11.18□□□□□ -0.62
SSBP3-215ENST00000533946 SNX14Q9Y5W7 946 aa11.18□□□□□ -0.62
SSBP3-215ENST00000533946 GBF1Q92538 1859 aa11.18□□□□□ -0.62
SSBP3-215ENST00000533946 TRANK1O15050 2925 aa11.18□□□□□ -0.62
SSBP3-215ENST00000533946 SPTBN5Q9NRC6 3674 aaKnown RBP11.17□□□□□ -0.62
SSBP3-215ENST00000533946 A6NJR5 290 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 DCDC2CA8MYV0 355 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 MEIS2O14770 477 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 ZNF286BP0CG31 522 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 GPNMBQ14956 572 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 PPP2R5BQ15173 497 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 TMEM240Q5SV17 173 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 NFXL1Q6ZNB6 911 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 VSIG10LQ86VR7 867 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 MICU3Q86XE3 530 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 NSUN6Q8TEA1 469 aaKnown RBP11.17□□□□□ -0.62
SSBP3-215ENST00000533946 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 PGBD1Q96JS3 809 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 NEK1Q96PY6 1258 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 UIMC1Q96RL1 719 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 NOC4LQ9BVI4 516 aaKnown RBP11.17□□□□□ -0.62
SSBP3-215ENST00000533946 ALDH8A1Q9H2A2 487 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-215ENST00000533946 SPC25Q9HBM1 224 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 MTMR10Q9NXD2 777 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 XIRP2A4UGR9 3374 aa11.17□□□□□ -0.62
SSBP3-215ENST00000533946 ERICH2A1L162 156 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 MMP3P08254 477 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 APOBRQ0VD83 1088 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 STXBP2Q15833 593 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 GDF6Q6KF10 455 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-215ENST00000533946 MFSD5Q6N075 450 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 CASC1Q6TDU7 716 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 TMTC3Q6ZXV5 915 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 ZNF365Q70YC5 407 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 FANCBQ8NB91 859 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 DHX38Q92620 1227 aaKnown RBP11.16□□□□□ -0.62
SSBP3-215ENST00000533946 KCNB2Q92953 911 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 SPZ1Q9BXG8 430 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 Q9Y3F1 56 aa11.16□□□□□ -0.62
SSBP3-215ENST00000533946 PTPRSQ13332 1948 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 CNTNAP5Q8WYK1 1306 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 GCOM1H8Y6P7 765 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-215ENST00000533946 ATP9AO75110 1047 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 DDAH1O94760 285 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 POLR2MP0CAP2 368 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 MYOGP15173 224 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 ADD1P35611 737 aaKnown RBP11.15□□□□□ -0.62
SSBP3-215ENST00000533946 LIFRP42702 1097 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 FPGSQ05932 587 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 FAM47CQ5HY64 1035 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 WWC2Q6AWC2 1192 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 APOA5Q6Q788 366 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 SGMS1Q86VZ5 419 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 MCF2L2Q86YR7 1114 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 TMEM87BQ96K49 555 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-215ENST00000533946 TMEM260Q9NX78 707 aa11.15□□□□□ -0.62
SSBP3-215ENST00000533946 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 EIF3JO75822 258 aaKnown RBP11.14□□□□□ -0.63
SSBP3-215ENST00000533946 UBA1P22314 1058 aaKnown RBP11.14□□□□□ -0.63
SSBP3-215ENST00000533946 HSPA4P34932 840 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 NT5C2P49902 561 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 TTLL4Q14679 1199 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 SART3Q15020 963 aaKnown RBP11.14□□□□□ -0.63
SSBP3-215ENST00000533946 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 Q6ZUG5 572 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 DHX32Q7L7V1 743 aaKnown RBP11.14□□□□□ -0.63
SSBP3-215ENST00000533946 SPRED2Q7Z698 418 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 TMCO2Q7Z6W1 182 aaPredicted RBP11.14□□□□□ -0.63
SSBP3-215ENST00000533946 TRIM50Q86XT4 487 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 CYP2W1Q8TAV3 490 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 RNPC3Q96LT9 517 aaKnown RBP11.14□□□□□ -0.63
SSBP3-215ENST00000533946 JAKMIP1Q96N16 626 aaKnown RBP11.14□□□□□ -0.63
SSBP3-215ENST00000533946 IWS1Q96ST2 819 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 HIPK3Q9H422 1215 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 PKD2L1Q9P0L9 805 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 SLC12A7Q9Y666 1083 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 MRVI1Q9Y6F6 885 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 MYO9BQ13459 2157 aa11.14□□□□□ -0.63
SSBP3-215ENST00000533946 FRMPD4Q14CM0 1322 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 ARHGEF15O94989 841 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 GGPS1O95749 300 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 GH1P01241 217 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 RABGGTBP53611 331 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 RASIP1Q5U651 963 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 OTOP2Q7RTS6 562 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 CTCFLQ8NI51 663 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-215ENST00000533946 RRP36Q96EU6 259 aaKnown RBP11.13□□□□□ -0.63
SSBP3-215ENST00000533946 MAP3K14Q99558 947 aa11.13□□□□□ -0.63
SSBP3-215ENST00000533946 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms