RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 AFG1LQ8WV93 481 aa25.32■■□□□ 1.64
NDUFS3-210ENST00000533105 ZFP91Q96JP5 570 aaPredicted RBP25.32■■□□□ 1.64
NDUFS3-210ENST00000533105 SEZ6LQ9BYH1 1024 aa25.32■■□□□ 1.64
NDUFS3-210ENST00000533105 BRPF3Q9ULD4 1205 aa25.32■■□□□ 1.64
NDUFS3-210ENST00000533105 REC8O95072 547 aa25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 HMGB1P09429 215 aaKnown RBP25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 CPA1P15085 419 aa25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 HSPA4P34932 840 aa25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 FGD1P98174 961 aa25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 VSIG10LQ86VR7 867 aa25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 SMARCC2Q8TAQ2 1214 aa25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 JAKMIP1Q96N16 626 aaKnown RBP25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 TRPV6Q9H1D0 765 aa25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 DDX41Q9UJV9 622 aaKnown RBP25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 NAP1L2Q9ULW6 460 aaPredicted RBP25.31■■□□□ 1.64
NDUFS3-210ENST00000533105 ZBTB43O43298 467 aa25.3■■□□□ 1.64
NDUFS3-210ENST00000533105 B4GALT4O60513 344 aa25.3■■□□□ 1.64
NDUFS3-210ENST00000533105 KPNA6O60684 536 aa25.3■■□□□ 1.64
NDUFS3-210ENST00000533105 CCND2P30279 289 aa25.3■■□□□ 1.64
NDUFS3-210ENST00000533105 EPHB4P54760 987 aa25.3■■□□□ 1.64
NDUFS3-210ENST00000533105 CHMP4BP1P59074 171 aa25.3■■□□□ 1.64
NDUFS3-210ENST00000533105 ARHGAP1Q07960 439 aa25.3■■□□□ 1.64
NDUFS3-210ENST00000533105 CUL5Q93034 780 aa25.3■■□□□ 1.64
NDUFS3-210ENST00000533105 KLF18A0A0U1RQI7 1052 aa25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 CENPBP07199 599 aaPredicted RBP25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 FAM47CQ5HY64 1035 aa25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 MFSD5Q6N075 450 aa25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 USP17L6PQ6QN14 398 aa25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 PPP1R13LQ8WUF5 828 aa25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 KCNB2Q92953 911 aa25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 ALDH8A1Q9H2A2 487 aaPredicted RBP25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 RBM28Q9NW13 759 aaKnown RBP25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 SNX14Q9Y5W7 946 aa25.29■■□□□ 1.64
NDUFS3-210ENST00000533105 RGS20O76081 388 aa25.28■■□□□ 1.64
NDUFS3-210ENST00000533105 MMP3P08254 477 aa25.28■■□□□ 1.64
NDUFS3-210ENST00000533105 RTN1Q16799 776 aa25.28■■□□□ 1.64
NDUFS3-210ENST00000533105 NBPF20Q3BBV1 942 aa25.28■■□□□ 1.64
NDUFS3-210ENST00000533105 SORBS3O60504 671 aa25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 CYP2C18P33260 490 aa25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 ERICH6BQ5W0A0 696 aa25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 BLOC1S2Q6QNY1 142 aa25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 HEATR3Q7Z4Q2 680 aa25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 DHX37Q8IY37 1157 aaKnown RBP25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 TMEM199Q8N511 208 aa25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 HIPK3Q9H422 1215 aa25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 TRMT13Q9NUP7 481 aaKnown RBP25.27■■□□□ 1.64
NDUFS3-210ENST00000533105 GOLGA8AA7E2F4 631 aa25.26■■□□□ 1.63
NDUFS3-210ENST00000533105 GOLGA8BA8MQT2 603 aa25.26■■□□□ 1.63
NDUFS3-210ENST00000533105 CSF2RAP15509 400 aa25.26■■□□□ 1.63
NDUFS3-210ENST00000533105 LAMC2Q13753 1193 aa25.26■■□□□ 1.63
NDUFS3-210ENST00000533105 KCNV1Q6PIU1 500 aa25.26■■□□□ 1.63
NDUFS3-210ENST00000533105 Q6ZUG5 572 aa25.26■■□□□ 1.63
NDUFS3-210ENST00000533105 RNPC3Q96LT9 517 aaKnown RBP25.26■■□□□ 1.63
NDUFS3-210ENST00000533105 PSTPIP2Q9H939 334 aa25.26■■□□□ 1.63
NDUFS3-210ENST00000533105 PIK3CDO00329 1044 aa25.25■■□□□ 1.63
NDUFS3-210ENST00000533105 MEIS2O14770 477 aa25.25■■□□□ 1.63
NDUFS3-210ENST00000533105 CASTP20810 708 aaKnown RBP25.25■■□□□ 1.63
NDUFS3-210ENST00000533105 PPIGQ13427 754 aaKnown RBP eCLIP25.25■■□□□ 1.634e-7■□□□□ 11.3
NDUFS3-210ENST00000533105 DGKDQ16760 1214 aa25.25■■□□□ 1.63
NDUFS3-210ENST00000533105 GPR153Q6NV75 609 aa25.25■■□□□ 1.63
NDUFS3-210ENST00000533105 GPKOWQ92917 476 aaPredicted RBP eCLIP25.25■■□□□ 1.635e-7■■■□□ 19
NDUFS3-210ENST00000533105 RTEL1Q9NZ71 1219 aa25.25■■□□□ 1.63
NDUFS3-210ENST00000533105 KIAA1217Q5T5P2 1943 aa25.25■■□□□ 1.63
NDUFS3-210ENST00000533105 FRMPD4Q14CM0 1322 aa25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 UMODL1Q5DID0 1318 aa25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 CNTNAP5Q8WYK1 1306 aa25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 GGPS1O95749 300 aa25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 SUPT20HL2P0C7V6 817 aa25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 APOBRQ0VD83 1088 aa25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 NFRKBQ6P4R8 1299 aa25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 Q7L0L9 218 aa25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 EMID1Q96A84 441 aaPredicted RBP25.24■■□□□ 1.63
NDUFS3-210ENST00000533105 ACRP10323 421 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 TGFB3P10600 412 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 CYP2C9P11712 490 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 UBA1P22314 1058 aaKnown RBP25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 CCL23P55773 120 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 MRPS9P82933 396 aaKnown RBP25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 SP2Q02086 613 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 UBE2SQ16763 222 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 GNPTABQ3T906 1256 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 CELF3Q5SZQ8 465 aaKnown RBP25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 DEFB123Q8N688 67 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 PPTC7Q8NI37 304 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 BRF1Q92994 677 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 SPATA33Q96N06 139 aa25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 NOC4LQ9BVI4 516 aaKnown RBP25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 V9GY48 417 aaPredicted RBP25.23■■□□□ 1.63
NDUFS3-210ENST00000533105 RPS6KB1P23443 525 aa25.22■■□□□ 1.63
NDUFS3-210ENST00000533105 PSMA5P28066 241 aa25.22■■□□□ 1.63
NDUFS3-210ENST00000533105 CDC27P30260 824 aa25.22■■□□□ 1.63
NDUFS3-210ENST00000533105 METAP2P50579 478 aaKnown RBP eCLIP25.22■■□□□ 1.63
NDUFS3-210ENST00000533105 MYSM1Q5VVJ2 828 aa25.22■■□□□ 1.63
NDUFS3-210ENST00000533105 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.22■■□□□ 1.632e-7■□□□□ 9.3
NDUFS3-210ENST00000533105 MLXIPQ9HAP2 919 aa25.22■■□□□ 1.63
NDUFS3-210ENST00000533105 STAM2O75886 525 aa25.21■■□□□ 1.63
NDUFS3-210ENST00000533105 WWC2Q6AWC2 1192 aa25.21■■□□□ 1.63
NDUFS3-210ENST00000533105 C16orf59Q7L2K0 433 aa25.21■■□□□ 1.63
NDUFS3-210ENST00000533105 KAT2BQ92831 832 aa25.21■■□□□ 1.63
NDUFS3-210ENST00000533105 FAM217BQ9NTX9 383 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms