RNA–Protein interactions for RNA: ENST00000528147.1

CDC27-205, Transcript of cell division cycle 27, humanhuman

TSL 4

Gene CDC27, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-205ENST00000528147 RAD50Q92878 1312 aa16.27■□□□□ 0.2
CDC27-205ENST00000528147 PTPN11Q06124 597 aaPredicted RBP16.27■□□□□ 0.2
CDC27-205ENST00000528147 GPNMBQ14956 572 aa16.27■□□□□ 0.2
CDC27-205ENST00000528147 IQCA1Q86XH1 822 aa16.27■□□□□ 0.2
CDC27-205ENST00000528147 KAT2BQ92831 832 aa16.27■□□□□ 0.2
CDC27-205ENST00000528147 SLC28A3Q9HAS3 691 aa16.27■□□□□ 0.2
CDC27-205ENST00000528147 MMP3P08254 477 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 ATP2A2P16615 1042 aaKnown RBP16.26■□□□□ 0.19
CDC27-205ENST00000528147 SEC23AQ15436 765 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 SLC35G1Q2M3R5 365 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 CCDC178Q5BJE1 867 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 AFG1LQ8WV93 481 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 SYMPKQ92797 1274 aaKnown RBP16.26■□□□□ 0.19
CDC27-205ENST00000528147 MTMR8Q96EF0 704 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 MPHOSPH6Q99547 160 aaKnown RBP16.26■□□□□ 0.19
CDC27-205ENST00000528147 KAT14Q9H8E8 782 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
CDC27-205ENST00000528147 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
CDC27-205ENST00000528147 COL4A4P53420 1690 aaPredicted RBP16.25■□□□□ 0.19
CDC27-205ENST00000528147 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
CDC27-205ENST00000528147 ARHGEF15O94989 841 aa16.25■□□□□ 0.19
CDC27-205ENST00000528147 RFC2P35250 354 aa16.25■□□□□ 0.19
CDC27-205ENST00000528147 LY6KQ17RY6 165 aa16.25■□□□□ 0.19
CDC27-205ENST00000528147 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
CDC27-205ENST00000528147 FAM47CQ5HY64 1035 aa16.25■□□□□ 0.19
CDC27-205ENST00000528147 DEFB128Q7Z7B8 93 aa16.25■□□□□ 0.19
CDC27-205ENST00000528147 STAG2Q8N3U4 1231 aa16.25■□□□□ 0.19
CDC27-205ENST00000528147 NSUN6Q8TEA1 469 aaKnown RBP16.25■□□□□ 0.19
CDC27-205ENST00000528147 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
CDC27-205ENST00000528147 DHX38Q92620 1227 aaKnown RBP16.25■□□□□ 0.19
CDC27-205ENST00000528147 IWS1Q96ST2 819 aa16.25■□□□□ 0.19
CDC27-205ENST00000528147 B4DLN1 442 aa16.24■□□□□ 0.19
CDC27-205ENST00000528147 HIP1O00291 1037 aa16.24■□□□□ 0.19
CDC27-205ENST00000528147 GSPT1P15170 499 aaKnown RBP16.24■□□□□ 0.19
CDC27-205ENST00000528147 HSD17B4P51659 736 aa16.24■□□□□ 0.19
CDC27-205ENST00000528147 MRPL12P52815 198 aaKnown RBP16.24■□□□□ 0.19
CDC27-205ENST00000528147 RBL2Q08999 1139 aa16.24■□□□□ 0.19
CDC27-205ENST00000528147 IMMTQ16891 758 aaKnown RBP16.24■□□□□ 0.19
CDC27-205ENST00000528147 PPP2R2DQ66LE6 453 aa16.24■□□□□ 0.19
CDC27-205ENST00000528147 GDF6Q6KF10 455 aaPredicted RBP16.24■□□□□ 0.19
CDC27-205ENST00000528147 PPM1EQ8WY54 764 aa16.24■□□□□ 0.19
CDC27-205ENST00000528147 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
CDC27-205ENST00000528147 RMDN3Q96TC7 470 aa16.24■□□□□ 0.19
CDC27-205ENST00000528147 BMP2KQ9NSY1 1161 aaPredicted RBP16.24■□□□□ 0.19
CDC27-205ENST00000528147 THEGQ9P2T0 379 aa16.24■□□□□ 0.19
CDC27-205ENST00000528147 DDX41Q9UJV9 622 aaKnown RBP16.24■□□□□ 0.19
CDC27-205ENST00000528147 ZBBXA8MT70 800 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 RBAK-RBAKDNI3L0D1 243 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 RGS20O76081 388 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 GH1P01241 217 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
CDC27-205ENST00000528147 HOXD8P13378 290 aaPredicted RBP16.23■□□□□ 0.19
CDC27-205ENST00000528147 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
CDC27-205ENST00000528147 PDE4AP27815 886 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 SEPT14Q6ZU15 432 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 FBXO11Q86XK2 927 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 MCF2L2Q86YR7 1114 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 ASB2Q96Q27 587 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 KRT23Q9C075 422 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 PXMP2Q9NR77 195 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 PCDHB13Q9Y5F0 798 aa16.23■□□□□ 0.19
CDC27-205ENST00000528147 TCF20Q9UGU0 1960 aaKnown RBP16.22■□□□□ 0.19
CDC27-205ENST00000528147 EPOPA6NHQ4 379 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 CA3P07451 260 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
CDC27-205ENST00000528147 IGFBP4P22692 258 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 BFSP2Q13515 415 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 STXBP2Q15833 593 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 CCDC85BQ15834 202 aaPredicted RBP16.22■□□□□ 0.19
CDC27-205ENST00000528147 TRAF7Q6Q0C0 670 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 PHOSPHO2Q8TCD6 241 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 SLC9A7Q96T83 725 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 CNNM2Q9H8M5 875 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 CTNNA3Q9UI47 895 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 MAD2L2Q9UI95 211 aa16.22■□□□□ 0.19
CDC27-205ENST00000528147 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
CDC27-205ENST00000528147 DOCK5Q9H7D0 1870 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 PALM3A6NDB9 673 aaPredicted RBP16.21■□□□□ 0.19
CDC27-205ENST00000528147 HAS3O00219 553 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
CDC27-205ENST00000528147 F2P00734 622 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 NR3C2P08235 984 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 PTGISQ16647 500 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 TCTN1Q2MV58 587 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 TMEM67Q5HYA8 995 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 STOX1Q6ZVD7 989 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 HERC6Q8IVU3 1022 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 AFAP1L1Q8TED9 768 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 PDCD2LQ9BRP1 358 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 UBAC1Q9BSL1 405 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 AMNQ9BXJ7 453 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 TAF6LQ9Y6J9 622 aa16.21■□□□□ 0.19
CDC27-205ENST00000528147 MICAL3Q7RTP6 2002 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms