RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FAM193AP78312 1265 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 OCRLQ01968 901 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 TNFAIP2Q03169 654 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 PDE4BQ07343 736 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 CCDC92Q53HC0 331 aaPredicted RBP4.78□□□□□ -1.64
SKP1-209ENST00000522552 PRR16Q569H4 304 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 SAMD5Q5TGI4 173 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 SLC6A19Q695T7 634 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 FAAH2Q6GMR7 532 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 CYP26C1Q6V0L0 522 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 RIPOR1Q6ZS17 1223 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 HDXQ7Z353 690 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 VN1R5Q7Z5H4 357 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 ADAT2Q7Z6V5 191 aaKnown RBP4.78□□□□□ -1.64
SKP1-209ENST00000522552 IGSF22Q8N9C0 903 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 DIS3LQ8TF46 1054 aaKnown RBP4.78□□□□□ -1.64
SKP1-209ENST00000522552 KCTD13Q8WZ19 329 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 SLC5A5Q92911 643 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 HPS3Q969F9 1004 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 TMEM87BQ96K49 555 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 GTPBP4Q9BZE4 634 aaKnown RBP4.78□□□□□ -1.64
SKP1-209ENST00000522552 BHMT2Q9H2M3 363 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 GPAMQ9HCL2 828 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 CRYL1Q9Y2S2 319 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 FAM155AB1AL88 458 aaPredicted RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 H3BRJ5 948 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 NOP56O00567 594 aaKnown RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 TMCC2O75069 709 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 CNOT4O95628 575 aaKnown RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 TBC1D8O95759 1140 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 ATP2A2P16615 1042 aaKnown RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 ABCB4P21439 1286 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 ITGA6P23229 1130 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 PRIM2P49643 509 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 KPNA1P52294 538 aaPredicted RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 GFRA1P56159 465 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 SCAND1P57086 179 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 MAP4K2Q12851 820 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 ACAP2Q15057 778 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 CLUL1Q15846 466 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 DDB1Q16531 1140 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 WDR44Q5JSH3 913 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 DCAF15Q66K64 600 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 LILRA6Q6PI73 481 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 DHX32Q7L7V1 743 aaKnown RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 ANKRD18AQ8IVF6 992 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 TRIM59Q8IWR1 403 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 PPP1R35Q8TAP8 253 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 TBC1D20Q96BZ9 403 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 ACSF2Q96CM8 615 aaPredicted RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 ZBTB10Q96DT7 871 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 ACSBG1Q96GR2 724 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 PAWRQ96IZ0 340 aaKnown RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 ZC3H12CQ9C0D7 883 aaKnown RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 CRISPLD1Q9H336 500 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 TIMMDC1Q9NPL8 285 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 CYP26B1Q9NR63 512 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 TBC1D22BQ9NU19 505 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 EMC9Q9Y3B6 208 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 RRN3P2A6NIE6 340 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 FAM227AF5H4B4 570 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 J3QW42 95 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 GFPT2O94808 682 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 BAIAP3O94812 1187 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 ESRRAP11474 423 aaPredicted RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 GMPRP36959 345 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 GUCY1A3Q02108 690 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 DGKKQ5KSL6 1271 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 GPATCH4Q5T3I0 446 aaKnown RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 SPOCD1Q6ZMY3 1216 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 GRAMD1CQ8IYS0 662 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 VWA5B2Q8N398 1253 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 CHCHD4Q8N4Q1 142 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 NKAIN3Q8N8D7 197 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 RSPH1Q8WYR4 309 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 IRF7Q92985 503 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 KIAA1191Q96A73 305 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 UBXN10Q96LJ8 280 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 SEC62Q99442 399 aaKnown RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 AP1M1Q9BXS5 423 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 SLC26A6Q9BXS9 759 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 GBP3Q9H0R5 595 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 RUBCNLQ9H714 662 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 CABP5Q9NP86 173 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 MARK1Q9P0L2 795 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 H2AFY2Q9P0M6 372 aaPredicted RBP4.77□□□□□ -1.65
SKP1-209ENST00000522552 B4GALT6Q9UBX8 382 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 FBXO10Q9UK96 956 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 ADAM30Q9UKF2 790 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 SOX13Q9UN79 622 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 ZNF652Q9Y2D9 606 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 NUB1Q9Y5A7 615 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 PCDHA8Q9Y5H6 950 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 TACC3Q9Y6A5 838 aa4.77□□□□□ -1.65
SKP1-209ENST00000522552 AQP7O14520 342 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 PPM1BO75688 479 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 TUSC2O75896 110 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 UBOX5O94941 541 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 GRK4P32298 578 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms