RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 POLR3EQ9NVU0 708 aa5.89□□□□□ -1.47
SDCBP-207ENST00000520168 GNEQ9Y223 722 aaKnown RBP5.89□□□□□ -1.47
SDCBP-207ENST00000520168 CTDP1Q9Y5B0 961 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-207ENST00000520168 ATG2AQ2TAZ0 1938 aa5.89□□□□□ -1.47
SDCBP-207ENST00000520168 PLXNA3P51805 1871 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 LCTP09848 1927 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 FAM181BA6NEQ2 426 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 IDH1O75874 414 aaKnown RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 CT47B1P0C2W7 299 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 FDX1P10109 184 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 JUNDP17535 347 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 CPT1AP50416 773 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 ERVK-21P61565 698 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 BEX3Q00994 111 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 ZP2Q05996 745 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 PTPN11Q06124 597 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 HERC4Q5GLZ8 1057 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 KIAA1755Q5JYT7 1200 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 NOL8Q76FK4 1167 aaKnown RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 DEFB128Q7Z7B8 93 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 SUGP1Q8IWZ8 645 aaKnown RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 NPAS3Q8IXF0 933 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 CCDC144CPQ8IYA2 1237 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 MIGA1Q8NAN2 632 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 PRPF38AQ8NAV1 312 aaKnown RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 RETREG2Q8NC44 543 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 GDPD5Q8WTR4 605 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 SSH1Q8WYL5 1049 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 VWCEQ96DN2 955 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 SLF1Q9BQI6 1058 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 RIOK1Q9BRS2 568 aaKnown RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 API5Q9BZZ5 524 aaKnown RBP5.88□□□□□ -1.47
SDCBP-207ENST00000520168 FTOQ9C0B1 505 aaKnown RBP eCLIP5.88□□□□□ -1.475e-6■□□□□ 9.5
SDCBP-207ENST00000520168 KATNBL1Q9H079 304 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 TRPV6Q9H1D0 765 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 KANSL2Q9H9L4 492 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 SNRKQ9NRH2 765 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 MCM9Q9NXL9 1143 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 FRYLO94915 3013 aa5.88□□□□□ -1.47
SDCBP-207ENST00000520168 WDR87Q6ZQQ6 2873 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 LOC102724159A0A0B4J2E5 919 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 MAGEB6P1A0A0J9YX57 407 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 USP17L12C9JPN9 530 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 USP17L21D6R901 530 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 ZBED4O75132 1171 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 CENPBP07199 599 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-207ENST00000520168 IQCF3P0C7M6 154 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 ZAP70P43403 619 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 PWP2Q15269 919 aaKnown RBP5.87□□□□□ -1.47
SDCBP-207ENST00000520168 TTF1Q15361 905 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-207ENST00000520168 BRDTQ58F21 947 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-207ENST00000520168 TNNI3KQ59H18 835 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 IQSEC1Q6DN90 963 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 NFRKBQ6P4R8 1299 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 PRSS33Q8NF86 280 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 CAGE1Q8TC20 777 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 AFAP1L1Q8TED9 768 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 PABPC5Q96DU9 382 aaKnown RBP5.87□□□□□ -1.47
SDCBP-207ENST00000520168 MRPL38Q96DV4 380 aaKnown RBP5.87□□□□□ -1.47
SDCBP-207ENST00000520168 SAMD11Q96NU1 681 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 RAD9AQ99638 391 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 SUGCTQ9HAC7 445 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 SMC4Q9NTJ3 1288 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 NXF1Q9UBU9 619 aaKnown RBP5.87□□□□□ -1.47
SDCBP-207ENST00000520168 FPGT-TNNI3KV9GXZ4 949 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 GRIN2DO15399 1336 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 RAD50Q92878 1312 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 TECTAO75443 2155 aa5.87□□□□□ -1.47
SDCBP-207ENST00000520168 ASTN1O14525 1302 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 PROB1E7EW31 1015 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 E9PSI1 815 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 SIAH2O43255 324 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 KPNA6O60684 536 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 GJB5O95377 273 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 EEF2P13639 858 aaKnown RBP5.86□□□□□ -1.47
SDCBP-207ENST00000520168 WDR5P61964 334 aaKnown RBP5.86□□□□□ -1.47
SDCBP-207ENST00000520168 COL19A1Q14993 1142 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 SMAD2Q15796 467 aaKnown RBP5.86□□□□□ -1.47
SDCBP-207ENST00000520168 NBPF20Q3BBV1 942 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 FAM83BQ5T0W9 1011 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 CNKSR3Q6P9H4 555 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 RETREG3Q86VR2 466 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 SIAH1Q8IUQ4 282 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 EDAQ92838 391 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 DDRGK1Q96HY6 314 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 CRBNQ96SW2 442 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 MEIS3Q99687 375 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 DBNDD2Q9BQY9 259 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 ACAD9Q9H845 621 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 SLC38A10Q9HBR0 1119 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 VTA1Q9NP79 307 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 DCP1AQ9NPI6 582 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-207ENST00000520168 PIH1D3Q9NQM4 214 aaKnown RBP5.86□□□□□ -1.47
SDCBP-207ENST00000520168 ATP8A2Q9NTI2 1148 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 TRMT13Q9NUP7 481 aaKnown RBP5.86□□□□□ -1.47
SDCBP-207ENST00000520168 FBXO28Q9NVF7 368 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 SYNPO2Q9UMS6 1093 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 INSL6Q9Y581 213 aa5.86□□□□□ -1.47
SDCBP-207ENST00000520168 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-207ENST00000520168 ZFHX4Q86UP3 3567 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms