RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 IL17AQ16552 155 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 ISM2Q6H9L7 571 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 TRAF1Q13077 416 aa20.45■□□□□ 0.86
SDC2-202ENST00000518385 CDKAL1Q5VV42 579 aa20.45■□□□□ 0.86
SDC2-202ENST00000518385 TOGARAM2Q6ZUX3 1019 aa20.45■□□□□ 0.86
SDC2-202ENST00000518385 USP50Q70EL3 339 aaPredicted RBP20.45■□□□□ 0.86
SDC2-202ENST00000518385 ANKRD20A12PQ8NF67 263 aa20.45■□□□□ 0.86
SDC2-202ENST00000518385 CUL5Q93034 780 aa20.45■□□□□ 0.86
SDC2-202ENST00000518385 CUEDC2Q9H467 287 aa20.45■□□□□ 0.86
SDC2-202ENST00000518385 MAGEF1Q9HAY2 307 aa20.45■□□□□ 0.86
SDC2-202ENST00000518385 ZBTB21Q9ULJ3 1066 aa20.45■□□□□ 0.86
SDC2-202ENST00000518385 A0A087X0B3 334 aa20.44■□□□□ 0.86
SDC2-202ENST00000518385 CTAGE9A4FU28 777 aa20.44■□□□□ 0.86
SDC2-202ENST00000518385 FOXN1O15353 648 aa20.44■□□□□ 0.86
SDC2-202ENST00000518385 OR52Z1P0C646 297 aa20.44■□□□□ 0.86
SDC2-202ENST00000518385 DCAF15Q66K64 600 aa20.44■□□□□ 0.86
SDC2-202ENST00000518385 TMEM51Q9NW97 253 aa20.44■□□□□ 0.86
SDC2-202ENST00000518385 POLR2AP24928 1970 aaKnown RBP20.44■□□□□ 0.86
SDC2-202ENST00000518385 SYNRGQ9UMZ2 1314 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 F5H6K3 240 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 MFAP3LO75121 409 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 SASH3O75995 380 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 EPHX2P34913 555 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 KLRC3Q07444 240 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 DPYDQ12882 1025 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 TBCKQ8TEA7 893 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 DCPSQ96C86 337 aaKnown RBP20.43■□□□□ 0.86
SDC2-202ENST00000518385 GINM1Q9NU53 330 aa20.43■□□□□ 0.86
SDC2-202ENST00000518385 GTPBP6O43824 516 aaPredicted RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 CCNT1O60563 726 aaKnown RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 CTNND1O60716 968 aaKnown RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 SEC31AO94979 1220 aaKnown RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 ASNSP08243 561 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 PRR29P0C7W0 189 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 UBA7P41226 1012 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 CLK2P49760 499 aaKnown RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 FMR1Q06787 632 aaKnown RBP eCLIP20.42■□□□□ 0.86
SDC2-202ENST00000518385 LETM2Q2VYF4 491 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 TTBK2Q6IQ55 1244 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 PDXDC2PQ6P474 469 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 BTNL9Q6UXG8 535 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 KCTD1Q719H9 257 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 IGSF22Q8N9C0 903 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 ZC3H15Q8WU90 426 aaKnown RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 COA7Q96BR5 231 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 RPGRIP1Q96KN7 1286 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 VIPAS39Q9H9C1 493 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 ARHGEF10LQ9HCE6 1279 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 MED4Q9NPJ6 270 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 RMND1Q9NWS8 449 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 BIN2Q9UBW5 565 aaPredicted RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 ADD3Q9UEY8 706 aaKnown RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 ZNF112Q9UJU3 913 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 LRRC10BA6NIK2 292 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 USP17L10C9JJH3 530 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 POLR3GO15318 223 aaPredicted RBP20.42■□□□□ 0.86
SDC2-202ENST00000518385 SUPT20HL1Q3ZLR7 823 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 PRAMEF18Q5VWM3 479 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 PPP4R3AQ6IN85 833 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 LEKR1Q6ZMV7 388 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 ZNF341Q9BYN7 854 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 TMEM60Q9H2L4 133 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 DISC1Q9NRI5 854 aa20.42■□□□□ 0.86
SDC2-202ENST00000518385 A0A1W2PRG0 241 aa20.41■□□□□ 0.86
SDC2-202ENST00000518385 IQCA1LA6NCM1 817 aa20.41■□□□□ 0.86
SDC2-202ENST00000518385 POTECB2RU33 542 aa20.41■□□□□ 0.86
SDC2-202ENST00000518385 GCFC2P16383 781 aaKnown RBP20.41■□□□□ 0.86
SDC2-202ENST00000518385 ADKP55263 362 aaKnown RBP20.41■□□□□ 0.86
SDC2-202ENST00000518385 CUL4BQ13620 913 aa20.41■□□□□ 0.86
SDC2-202ENST00000518385 ZSCAN26Q16670 478 aa20.41■□□□□ 0.86
SDC2-202ENST00000518385 BEND6Q5SZJ8 279 aaPredicted RBP20.41■□□□□ 0.86
SDC2-202ENST00000518385 ZNF662Q6ZS27 426 aa20.41■□□□□ 0.86
SDC2-202ENST00000518385 APTXQ7Z2E3 356 aaKnown RBP20.41■□□□□ 0.86
SDC2-202ENST00000518385 FAM71BQ8TC56 605 aa20.41■□□□□ 0.86
SDC2-202ENST00000518385 NAPGQ99747 312 aaPredicted RBP20.41■□□□□ 0.86
SDC2-202ENST00000518385 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
SDC2-202ENST00000518385 LIMA1Q9UHB6 759 aaKnown RBP20.41■□□□□ 0.86
SDC2-202ENST00000518385 BMP3P12645 472 aa20.4■□□□□ 0.86
SDC2-202ENST00000518385 ACTN2P35609 894 aa20.4■□□□□ 0.86
SDC2-202ENST00000518385 RRAGBQ5VZM2 374 aa20.4■□□□□ 0.86
SDC2-202ENST00000518385 CYP26C1Q6V0L0 522 aa20.4■□□□□ 0.86
SDC2-202ENST00000518385 RAB34Q9BZG1 259 aa20.4■□□□□ 0.86
SDC2-202ENST00000518385 TAF1DQ9H5J8 278 aaPredicted RBP20.4■□□□□ 0.86
SDC2-202ENST00000518385 TMX2Q9Y320 296 aa20.4■□□□□ 0.86
SDC2-202ENST00000518385 SCN4AP35499 1836 aa20.4■□□□□ 0.86
SDC2-202ENST00000518385 CTAGE15A4D2H0 777 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 PPP1R11O60927 126 aaPredicted RBP20.39■□□□□ 0.85
SDC2-202ENST00000518385 NDUFB10O96000 172 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 CTAGE8P0CG41 777 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 STAT6P42226 847 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 AFMP43652 599 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 PDIA5Q14554 519 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 QRICH1Q2TAL8 776 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 MAP9Q49MG5 647 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 WDR93Q6P2C0 686 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 CTAGE6Q86UF2 777 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 SULF1Q8IWU6 871 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 CTAGE4Q8IX94 777 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 SH2D4AQ9H788 454 aa20.39■□□□□ 0.85
SDC2-202ENST00000518385 ADAM21Q9UKJ8 722 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms