RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 GCNT3O95395 438 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 CCND2P30279 289 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 LIG4P49917 911 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 EPHB4P54760 987 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 POSTNQ15063 836 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 PROSER3Q2NL68 480 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 KCTD16Q68DU8 428 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 TTC19Q6DKK2 380 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 NACC1Q96RE7 527 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 CXorf56Q9H5V9 222 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 YY1AP1Q9H869 796 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 ARHGAP42A6NI28 874 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 AOC3Q16853 763 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 LGSNQ5TDP6 509 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 PEX26Q7Z412 305 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 XAB2Q9HCS7 855 aaKnown RBP13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 STAP2Q9UGK3 403 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 NRBP1Q9UHY1 535 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 DAPK3O43293 454 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 FGAP02671 866 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 POLGP54098 1239 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 SLC7A3Q8WY07 619 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
PCDHGA6-201ENST00000517434 PTPRMP28827 1452 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 ADALQ6DHV7 355 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 MIS18BP1Q6P0N0 1132 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 CRAMP1Q96RY5 1269 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 CYP19A1P11511 503 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 CD19P15391 556 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 KIF11P52732 1056 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 TMED1Q13445 227 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 CASP8Q14790 479 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 INTS9Q9NV88 658 aaKnown RBP13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 TTC36A6NLP5 189 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 KRT19P08727 400 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 GNAT1P11488 350 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 SPECC1L-ADORA2AF8WAN1 911 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 ADD2P35612 726 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 ARL1P40616 181 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 DMP1Q13316 513 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 P3H4Q92791 437 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 RILPQ96NA2 401 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 PUS3Q9BZE2 481 aaKnown RBP13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 VPS54Q9P1Q0 977 aa13.35□□□□□ -0.27
PCDHGA6-201ENST00000517434 TNNI1P19237 187 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 KCNQ4P56696 695 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 POLA2Q14181 598 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 CCDC105Q8IYK2 499 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 RNF169Q8NCN4 708 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 SUFUQ9UMX1 484 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 FRMPD2Q68DX3 1309 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 FASTKD5Q7L8L6 764 aaKnown RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 GIMAP8Q8ND71 665 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 MYL10Q9BUA6 226 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 RNF26Q9BY78 433 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 YIPF3Q9GZM5 350 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 PLEKHA4Q9H4M7 779 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 NCOA5Q9HCD5 579 aaKnown RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 SCINQ9Y6U3 715 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 ZSCAN20P17040 1043 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 FAM102BQ5T8I3 360 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 SYDE2Q5VT97 1194 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 OTUD7AQ8TE49 926 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 MRRFQ96E11 262 aaKnown RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 DDX25Q9UHL0 483 aaKnown RBP13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 SPATA31A1Q5TZJ5 1347 aa13.34□□□□□ -0.27
PCDHGA6-201ENST00000517434 ECE2O60344 883 aa13.33□□□□□ -0.27
PCDHGA6-201ENST00000517434 PHKBQ93100 1093 aa13.33□□□□□ -0.27
PCDHGA6-201ENST00000517434 CUEDC2Q9H467 287 aa13.33□□□□□ -0.27
PCDHGA6-201ENST00000517434 METTL14Q9HCE5 456 aaKnown RBP13.33□□□□□ -0.27
PCDHGA6-201ENST00000517434 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 SEPT2Q15019 361 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 CCDC92Q53HC0 331 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 HESX1Q9UBX0 185 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 DBNLQ9UJU6 430 aaKnown RBP13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 CRKP46108 304 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 PKP1Q13835 747 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 NOSTRINQ8IVI9 506 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 CENPKQ9BS16 269 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 SUGCTQ9HAC7 445 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 MTMR6Q9Y217 621 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 RANBP1P43487 201 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 ESRRGP62508 458 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 KLHL30Q0D2K2 578 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 MAIP1Q8WWC4 291 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 AGTPBP1Q9UPW5 1226 aa13.33□□□□□ -0.28
PCDHGA6-201ENST00000517434 ANKRD65E5RJM6 399 aa13.32□□□□□ -0.28
PCDHGA6-201ENST00000517434 PFKFB2O60825 505 aa13.32□□□□□ -0.28
PCDHGA6-201ENST00000517434 ALS2CLQ60I27 953 aa13.32□□□□□ -0.28
PCDHGA6-201ENST00000517434 TRMT44Q8IYL2 757 aaKnown RBP13.32□□□□□ -0.28
PCDHGA6-201ENST00000517434 PSMD1Q99460 953 aa13.32□□□□□ -0.28
PCDHGA6-201ENST00000517434 GLI2P10070 1586 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms