RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 CALCRLQ16602 461 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 TMEM266Q2M3C6 531 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 ASPRV1Q53RT3 343 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 HYIQ5T013 277 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 PPP4R3AQ6IN85 833 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 MAPKAPK5Q8IW41 473 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 AFAP1L1Q8TED9 768 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 CEP95Q96GE4 821 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 CAPZA3Q96KX2 299 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 PIGSQ96S52 555 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 RAB34Q9BZG1 259 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 PODXL2Q9NZ53 605 aa7.4□□□□□ -1.22
CDH12-203ENST00000517378 IGKV6D-41A0A0C4DH26 115 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 MACROD2A1Z1Q3 448 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 SLC37A4O43826 429 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 CLK2P49760 499 aaKnown RBP7.4□□□□□ -1.23
CDH12-203ENST00000517378 MARSP56192 900 aaKnown RBP7.4□□□□□ -1.23
CDH12-203ENST00000517378 CCDC96Q2M329 555 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 CCDC70Q6NSX1 233 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 PDXDC1Q6P996 788 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 USP17L2Q6R6M4 530 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 C2CD5Q86YS7 1000 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 CAGE1Q8TC20 777 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 PCMTD1Q96MG8 357 aaPredicted RBP7.4□□□□□ -1.23
CDH12-203ENST00000517378 ALS2CR12Q96Q35 445 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 NUCKS1Q9H1E3 243 aaKnown RBP7.4□□□□□ -1.23
CDH12-203ENST00000517378 SLC39A2Q9NP94 309 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 ANKIB1Q9P2G1 1089 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 SAP30BPQ9UHR5 308 aaKnown RBP7.4□□□□□ -1.23
CDH12-203ENST00000517378 HYOU1Q9Y4L1 999 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 MYO3BQ8WXR4 1341 aa7.4□□□□□ -1.23
CDH12-203ENST00000517378 LTBP4Q8N2S1 1624 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 LRRC53A6NM62 1247 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 MYO1CO00159 1063 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 GNPATO15228 680 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 EIF4A3P38919 411 aaKnown RBP7.39□□□□□ -1.23
CDH12-203ENST00000517378 ADCY7P51828 1080 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 C2orf54Q08AI8 447 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 HGSNATQ68CP4 663 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 LRRC31Q6UY01 552 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 KRT26Q7Z3Y9 468 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 ZC3H3Q8IXZ2 948 aaKnown RBP7.39□□□□□ -1.23
CDH12-203ENST00000517378 RNF10Q8N5U6 811 aaKnown RBP7.39□□□□□ -1.23
CDH12-203ENST00000517378 CERKQ8TCT0 537 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 OSBPL9Q96SU4 736 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 SH3GL2Q99962 352 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 CPVLQ9H3G5 476 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 JADE2Q9NQC1 790 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 TNNT3P45378 269 aaPredicted RBP7.39□□□□□ -1.23
CDH12-203ENST00000517378 GABPAQ06546 454 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 NFIXQ14938 502 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 CRY2Q49AN0 593 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 GLE1Q53GS7 698 aaKnown RBP7.39□□□□□ -1.23
CDH12-203ENST00000517378 TEX11Q8IYF3 940 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 SPATA4Q8NEY3 305 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 HPS3Q969F9 1004 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 CAVIN3Q969G5 261 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 EEF2KMTQ96G04 330 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 CEP63Q96MT8 703 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 TMEM260Q9NX78 707 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 CEP72Q9P209 647 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 RNF14Q9UBS8 474 aa7.39□□□□□ -1.23
CDH12-203ENST00000517378 BIN2Q9UBW5 565 aaPredicted RBP7.39□□□□□ -1.23
CDH12-203ENST00000517378 RRP15Q9Y3B9 282 aaKnown RBP7.39□□□□□ -1.23
CDH12-203ENST00000517378 RTCBQ9Y3I0 505 aaKnown RBP7.39□□□□□ -1.23
CDH12-203ENST00000517378 UBR3Q6ZT12 1888 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 USP17L5A8MUK1 530 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 TDP2O95551 362 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 EPB41P11171 864 aaKnown RBP7.38□□□□□ -1.23
CDH12-203ENST00000517378 GCFC2P16383 781 aaKnown RBP7.38□□□□□ -1.23
CDH12-203ENST00000517378 GGCXP38435 758 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 TXKP42681 527 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 KCNQ4P56696 695 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 NNTQ13423 1086 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 EMBQ6PCB8 327 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 SMIM5Q71RC9 77 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 AMIGO3Q86WK7 504 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 SLF2Q8IX21 1173 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 GOLGA6L1Q8N7Z2 621 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 DDX12PQ92771 950 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 ARHGEF1Q92888 912 aaKnown RBP7.38□□□□□ -1.23
CDH12-203ENST00000517378 DNAJC19Q96DA6 116 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 TSG101Q99816 390 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 CRACR2AQ9BSW2 395 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 MLXIPQ9HAP2 919 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 CD209Q9NNX6 404 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 FAM207AQ9NSI2 230 aaPredicted RBP7.38□□□□□ -1.23
CDH12-203ENST00000517378 RNF216Q9NWF9 866 aaPredicted RBP7.38□□□□□ -1.23
CDH12-203ENST00000517378 MTMR4Q9NYA4 1195 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 MYH4Q9Y623 1939 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 PPFIA4O75335 1185 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 MOCS3O95396 460 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 GNA14O95837 355 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 EPHB4P54760 987 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 GPSM2P81274 684 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 KCNMA1Q12791 1236 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 KRT79Q5XKE5 535 aa7.38□□□□□ -1.23
CDH12-203ENST00000517378 HAUS3Q68CZ6 603 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms