RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 C1orf112Q9NSG2 853 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 ENC1O14682 589 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 MAN2A1Q16706 1144 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 RNF10Q8N5U6 811 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 WDR19Q8NEZ3 1342 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 EPHB4P54760 987 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 BBOF1Q8ND07 529 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 SPC25Q9HBM1 224 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 SEC31AO94979 1220 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 CYP2E1P05181 493 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 DMTNQ08495 405 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 RSAD2Q8WXG1 361 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 ATP2A3Q93084 1043 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 VCXQ9H320 206 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 A0A087WWV3 80 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 PRPF6O94906 941 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 CDK8P49336 464 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 SARM1Q6SZW1 724 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 PALM2Q8IXS6 379 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 RUNDC3BQ96NL0 473 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 PIGSQ96S52 555 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 WDR11Q9BZH6 1224 aa17.65■□□□□ 0.42
HMGXB3-202ENST00000503427 IFNB1P01574 187 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 LMNB1P20700 586 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 LRCH2Q5VUJ6 765 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 KCTD1Q719H9 257 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 PHLDB2Q86SQ0 1253 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 SMYD4Q8IYR2 804 aaPredicted RBP17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 SLC17A8Q8NDX2 589 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 PANX2Q96RD6 677 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 RNF14Q9UBS8 474 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 KIAA1024Q9UPX6 916 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 TRPC6Q9Y210 931 aa17.64■□□□□ 0.42
HMGXB3-202ENST00000503427 CRCPO75575 148 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 HOXA7P31268 230 aaPredicted RBP17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 SPICE1Q8N0Z3 855 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 RAB3IPQ96QF0 476 aaPredicted RBP17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 NR5A1Q13285 461 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 CASC4Q6P4E1 433 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 DYNLL2Q96FJ2 89 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 KRT12Q99456 494 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 NRBP2Q9NSY0 501 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 STK17AQ9UEE5 414 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 LIG4P49917 911 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 SF3A3Q12874 501 aaKnown RBP eCLIP17.64■□□□□ 0.412e-10■■■■□ 21
HMGXB3-202ENST00000503427 AOC3Q16853 763 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 CCDC13Q8IYE1 715 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 CCDC170Q8IYT3 715 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 TBCKQ8TEA7 893 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 TBC1D31Q96DN5 1066 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 EEF2KMTQ96G04 330 aa17.64■□□□□ 0.41
HMGXB3-202ENST00000503427 ZNF526Q8TF50 670 aaPredicted RBP17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 SAMSN1Q9NSI8 373 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 PASKQ96RG2 1323 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 CYP2D7A0A087X1C5 515 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 STAT2P52630 851 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 FKBP3Q00688 224 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 GRAMD1CQ8IYS0 662 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 RAD17O75943 681 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 GDF11O95390 407 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 HADHQ16836 314 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 DALRD3Q5D0E6 543 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 ARMCX5Q6P1M9 558 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 NCAPG2Q86XI2 1143 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 FAM114A2Q9NRY5 505 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 FRMPD1Q5SYB0 1578 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 THAP12O43422 761 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 PTPROQ16827 1216 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 PPM1KQ8N3J5 372 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 MYO3AQ8NEV4 1616 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 NBPF26B4DH59 902 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 COBLO75128 1261 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 ZBED6P86452 979 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 DMP1Q13316 513 aaPredicted RBP17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 CIAPIN1Q6FI81 312 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 NBPF10Q6P3W6 841 aaKnown RBP17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 CTAGE3PQ8IX95 158 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 NBPF15Q8N660 670 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 GJA10Q969M2 543 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 THAP9Q9H5L6 903 aa17.63■□□□□ 0.41
HMGXB3-202ENST00000503427 NR2F2P24468 414 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 RCAN1P53805 252 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 SYDE2Q5VT97 1194 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 FAM160B2Q86V87 743 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 RASGRP4Q8TDF6 673 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 ATP6V0A1Q93050 837 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 ALX1Q15699 326 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 RABL6Q3YEC7 729 aaPredicted RBP17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 TBC1D9BQ66K14 1250 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 GAP43P17677 238 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 LIG3P49916 1009 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 CCNA1P78396 465 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 CYP4A11Q02928 519 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 PODNQ7Z5L7 613 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 CCDC125Q86Z20 511 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 CCDC117Q8IWD4 279 aaPredicted RBP17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 ARHGEF1Q92888 912 aaKnown RBP17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 SH3GLB2Q9NR46 395 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 ADAMTS13Q76LX8 1427 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms