RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 GNL2Q13823 731 aaKnown RBP3.86□□□□□ -1.79
HMGB1P35-201ENST00000503360 AXDND1Q5T1B0 1012 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P35-201ENST00000503360 YTHDC1Q96MU7 727 aaKnown RBP3.86□□□□□ -1.79
HMGB1P35-201ENST00000503360 WWC2-AS2Q96NR7 200 aa3.86□□□□□ -1.79
HMGB1P35-201ENST00000503360 TINF2Q9BSI4 451 aa3.86□□□□□ -1.79
HMGB1P35-201ENST00000503360 BCAS3Q9H6U6 928 aa3.86□□□□□ -1.79
HMGB1P35-201ENST00000503360 FBLN5Q9UBX5 448 aa3.86□□□□□ -1.79
HMGB1P35-201ENST00000503360 APOBRQ0VD83 1088 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 FOXE3Q13461 319 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 FHL2Q14192 279 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 TCEAL1Q15170 157 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 SEZ6Q53EL9 994 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 GK5Q6ZS86 529 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 ARHGEF18Q6ZSZ5 1173 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 GPRASP2Q96D09 838 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 WRNIP1Q96S55 665 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 AP5M1Q9H0R1 490 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 UBP1Q9NZI7 540 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 ZNRF3Q9ULT6 936 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 RWDD3Q9Y3V2 267 aa3.85□□□□□ -1.79
HMGB1P35-201ENST00000503360 DDX3XO00571 662 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 PPP1R11O60927 126 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 DNAJA1P31689 397 aaKnown RBP3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 GJA8P48165 433 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 ARID5AQ03989 594 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 ABHD18Q0P651 414 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 GRB10Q13322 594 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 DCAF15Q66K64 600 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 PPFIBP1Q86W92 1011 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 VPS37DQ86XT2 251 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 FAM126BQ8IXS8 530 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 KLHL36Q8N4N3 616 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 SLC43A3Q8NBI5 491 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 RBBP8NLQ8NC74 664 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 IGDCC4Q8TDY8 1250 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 SEC14L1Q92503 715 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 BRF1Q92994 677 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 CHFRQ96EP1 664 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 TMEM168Q9H0V1 697 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 SEC61A2Q9H9S3 476 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 RXFP1Q9HBX9 757 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 WHRNQ9P202 907 aa3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 ING1Q9UK53 422 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P35-201ENST00000503360 NPHS1O60500 1241 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 PAMP19021 973 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 SEPHS1P49903 392 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 ADAM9Q13443 819 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 HS1BP3Q53T59 392 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 SPDYAQ5MJ70 313 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 CD300LDQ6UXZ3 194 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 RIOX2Q8IUF8 465 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 Q8TCH9 128 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 PLEKHO2Q8TD55 490 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 RASGRP4Q8TDF6 673 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 USP33Q8TEY7 942 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 SREK1Q8WXA9 508 aaKnown RBP3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 NKD1Q969G9 470 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 TANGO6Q9C0B7 1094 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 NOL6Q9H6R4 1146 aaKnown RBP3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 USP35Q9P2H5 1018 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 PPP1R1BQ9UD71 204 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 ZNF214Q9UL59 606 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 ZNF451Q9Y4E5 1061 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 BACE2Q9Y5Z0 518 aa3.83□□□□□ -1.8
HMGB1P35-201ENST00000503360 CYP1A1P04798 512 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 ATF4P18848 351 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 MCM4P33991 863 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 IL13P35225 146 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 NASPP49321 788 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 SF3A1Q15459 793 aaKnown RBP3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 ZNF585AQ6P3V2 769 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 PALM2Q8IXS6 379 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 ZNF503Q96F45 646 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 RCC1LQ96I51 464 aaKnown RBP3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 SPATA32Q96LK8 384 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 ZDHHC15Q96MV8 337 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 CEP89Q96ST8 783 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 MMP19Q99542 508 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 L2HGDHQ9H9P8 463 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 GINM1Q9NU53 330 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 HSPBP1Q9NZL4 362 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 EFR3BQ9Y2G0 817 aa3.82□□□□□ -1.8
HMGB1P35-201ENST00000503360 NPHP3-ACAD11A0A0J9YXS1 232 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 C7orf72A4D263 438 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 C2orf71A6NGG8 1288 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 SGSM2O43147 1006 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 CBFA2T2O43439 604 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 NTRK1P04629 796 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 TGM1P22735 817 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 NKX3-2P78367 333 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 PRKD1Q15139 912 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 CR1LQ2VPA4 569 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 MROH9Q5TGP6 573 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 PRAMEF18Q5VWM3 479 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 RNF207Q6ZRF8 634 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 KBTBD2Q8IY47 623 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 Q8N1Y9 231 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 ARHGEF39Q8N4T4 335 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 EDAQ92838 391 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 SEC16BQ96JE7 1060 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms