RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PXDNLA1KZ92 1463 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 THAP12O43422 761 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 GCNT3O95395 438 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 PLS1Q14651 629 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 EPHA10Q5JZY3 1008 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 FAM196AQ6ZSG2 479 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 ADAT2Q7Z6V5 191 aaKnown RBP18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 GPBP1Q86WP2 473 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 NCAPD2Q15021 1401 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 SETSIPP0DME0 302 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 FERP16591 822 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 PLTPP55058 493 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 CUL4BQ13620 913 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 SEPT2Q15019 361 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 HVCN1Q96D96 273 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 EPN3Q9H201 632 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 TXLNGQ9NUQ3 528 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 PCDHB13Q9Y5F0 798 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 MSANTD4Q8NCY6 345 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 DISC1Q9NRI5 854 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 PICALMQ13492 652 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 C6orf118Q5T5N4 469 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 RASIP1Q5U651 963 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 SPATA4Q8NEY3 305 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 LARP4BQ92615 738 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 LIMA1Q9UHB6 759 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 CD2APQ9Y5K6 639 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 NRXN1Q9ULB1 1477 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 HSPA6P17066 643 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 ARHGAP44Q17R89 818 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 MAGOHBQ96A72 148 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 SPZ1Q9BXG8 430 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 L1RE1Q9UN81 338 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 EXOC3O60645 756 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 N4BP1O75113 896 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 LMNB1P20700 586 aa18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 FMR1Q06787 632 aaKnown RBP eCLIP18.79■□□□□ 0.64e-6■■■■□ 22.5
HMGXB3-201ENST00000502717 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-201ENST00000502717 KRT5P13647 590 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 PPP2R2AP63151 447 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 PSMD1Q99460 953 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 COL4A3BPQ9Y5P4 624 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 SALL3Q9BXA9 1300 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 RIMBP2O15034 1052 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 CASP1P29466 404 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 CDC25AP30304 524 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 LRRC31Q6UY01 552 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 STK17AQ9UEE5 414 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 SUFUQ9UMX1 484 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 BCS1LQ9Y276 419 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 I3L4J1 428 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 ARHGEF18Q6ZSZ5 1173 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 TEX11Q8IYF3 940 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 BBOF1Q8ND07 529 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 KCND1Q9NSA2 647 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 CAPN11Q9UMQ6 739 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 GRID2IPA4D2P6 1211 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 VPS37BQ9H9H4 285 aa18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
HMGXB3-201ENST00000502717 ADCY8P40145 1251 aa18.77■□□□□ 0.6
HMGXB3-201ENST00000502717 PRCPP42785 496 aa18.77■□□□□ 0.6
HMGXB3-201ENST00000502717 ADCY2Q08462 1091 aa18.77■□□□□ 0.6
HMGXB3-201ENST00000502717 LRRC63Q05C16 580 aa18.77■□□□□ 0.6
HMGXB3-201ENST00000502717 SEMA3FQ13275 785 aa18.77■□□□□ 0.6
HMGXB3-201ENST00000502717 NIM1KQ8IY84 436 aa18.77■□□□□ 0.6
HMGXB3-201ENST00000502717 ZMYND12Q9H0C1 365 aa18.77■□□□□ 0.6
HMGXB3-201ENST00000502717 RCAN1P53805 252 aa18.77■□□□□ 0.59
HMGXB3-201ENST00000502717 CFAP157Q5JU67 520 aa18.77■□□□□ 0.59
HMGXB3-201ENST00000502717 WDR93Q6P2C0 686 aa18.77■□□□□ 0.59
HMGXB3-201ENST00000502717 PI16Q6UXB8 463 aa18.77■□□□□ 0.59
HMGXB3-201ENST00000502717 ELOA2Q8IYF1 753 aaPredicted RBP18.77■□□□□ 0.59
HMGXB3-201ENST00000502717 LRRC8CQ8TDW0 803 aa18.77■□□□□ 0.59
HMGXB3-201ENST00000502717 SNX12Q9UMY4 172 aa18.77■□□□□ 0.59
HMGXB3-201ENST00000502717 PCDHA12Q9UN75 941 aa18.77■□□□□ 0.59
HMGXB3-201ENST00000502717 RASGRF2O14827 1237 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 HNRNPH1P31943 449 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 SESN3P58005 492 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 RNASELQ05823 741 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 SEPT6Q14141 434 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 RSRC2Q7L4I2 434 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 MYCT1Q8N699 235 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 SH2D4AQ9H788 454 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 ATP8A2Q9NTI2 1148 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 TPX2Q9ULW0 747 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 NFRKBQ6P4R8 1299 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 ELAC2Q9BQ52 826 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 MAP3K15Q6ZN16 1313 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 PSMD14O00487 310 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 SART1O43290 800 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 MMEP08473 750 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 ELF1P32519 619 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 IRX4P78413 519 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 NBPF10Q6P3W6 841 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 MLXIPQ9HAP2 919 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 UBN2Q6ZU65 1347 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 CDC27P30260 824 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 PDE6CP51160 858 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 PSMD2Q13200 908 aa18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 NOA1Q8NC60 698 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-201ENST00000502717 SMCR8Q8TEV9 937 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms