RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 TBC1D8BQ0IIM8 1120 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 RESTQ13127 1097 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 NELFCDQ8IXH7 590 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 OR6J1Q8NGC5 347 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 AK8Q96MA6 479 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 TDP2O95551 362 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 NR3C2P08235 984 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 POTEDQ86YR6 584 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 NACC1Q96RE7 527 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 PPP1R16BQ96T49 567 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 KCNG1Q9UIX4 513 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 VWA5AO00534 786 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 SH3BP5LQ7L8J4 393 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 CTNND2Q9UQB3 1225 aa10.54□□□□□ -0.72
GAPVD1-219ENST00000495955 IPO5O00410 1097 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 PPP6R2O75170 966 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 POTEJP0CG39 1038 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 DMP1Q13316 513 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 KCNB2Q92953 911 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 TAAR1Q96RJ0 339 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 FNBP1Q96RU3 617 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 IMPG2Q9BZV3 1241 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 PUF60Q9UHX1 559 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 N4BP3O15049 544 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 SHROOM1Q2M3G4 852 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 TATDN1Q6P1N9 297 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 JPH2Q9BR39 696 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 WDR64B1ANS9 1081 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 K7ENM7 598 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 CMA1P23946 247 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 USP11P51784 963 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 CEP55Q53EZ4 464 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 CPLX3Q8WVH0 158 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 CALUO43852 315 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 TAL1P17542 331 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 PRELPP51888 382 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 KRT76Q01546 638 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 PNOCQ13519 176 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 KCNV1Q6PIU1 500 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 AOPEPQ8N6M6 819 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 C7orf31Q8N865 590 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 ZNF384Q8TF68 577 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 PHF20Q9BVI0 1012 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
GAPVD1-219ENST00000495955 TFDP1Q14186 410 aa10.52□□□□□ -0.72
GAPVD1-219ENST00000495955 DCAF17Q5H9S7 520 aaPredicted RBP10.52□□□□□ -0.72
GAPVD1-219ENST00000495955 CAPNS2Q96L46 248 aa10.52□□□□□ -0.72
GAPVD1-219ENST00000495955 GRPEL1Q9HAV7 217 aa10.52□□□□□ -0.72
GAPVD1-219ENST00000495955 NUP188Q5SRE5 1749 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 POTEMA6NI47 508 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 ERLIN2O94905 339 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 C6orf222P0C671 652 aaPredicted RBP10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 POTEIP0CG38 1075 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 SPOUT1Q5T280 376 aaKnown RBP10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 SWSAP1Q6NVH7 229 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 NBPF11Q86T75 865 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 ZNF592Q92610 1267 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 LARP4BQ92615 738 aaKnown RBP10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 WDR18Q9BV38 432 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 FAM49AQ9H0Q0 323 aaPredicted RBP10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 ZNF302Q9NR11 478 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 TYRO3Q06418 890 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 CATSPERGQ6ZRH7 1159 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 CYFIP1Q7L576 1253 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 LINC00301Q8NCQ3 95 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 NLRP7Q8WX94 980 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 FAM20AQ96MK3 541 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 ERVK-9P63128 1117 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 ERVK-24P63145 666 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 FAM178BQ8IXR5 827 aa10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 LARSQ9P2J5 1176 aaKnown RBP10.52□□□□□ -0.73
GAPVD1-219ENST00000495955 COL1A1P02452 1464 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 EPB41P11171 864 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 PSMC4P43686 418 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 CACNB1Q02641 598 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 GMLQ99445 158 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 CLSTN2Q9H4D0 955 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 ZSWIM4Q9H7M6 989 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 EFCC1Q9HA90 598 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 LUC7LQ9NQ29 371 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 DISC1Q9NRI5 854 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 SLC9A2Q9UBY0 812 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 SPDYE5A6NIY4 337 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 GGPS1O95749 300 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 CAVIN2O95810 425 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 NDUFA8P51970 172 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 BIRC3Q13489 604 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 TREML2Q5T2D2 321 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 EXOC8Q8IYI6 725 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 HACE1Q8IYU2 909 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 ERCC4Q92889 916 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 COL4A3BPQ9Y5P4 624 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 KIF28PB7ZC32 967 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 NFIBO00712 420 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 RARBP10826 455 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 PPP1R2P41236 205 aa10.51□□□□□ -0.73
GAPVD1-219ENST00000495955 LIG4P49917 911 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms