RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 PSTPIP2Q9H939 334 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 MYO1AQ9UBC5 1043 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 A0A0U1RQJ8 604 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 POTEMA6NI47 508 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 B4DLN1 442 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 CLCN6P51797 869 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 MCM6Q14566 821 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 ZNF569Q5MCW4 686 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 SNX29Q8TEQ0 813 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 ATRIPQ8WXE1 791 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
CHTOP-206ENST00000495554 ZNF446Q9NWS9 450 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 DDX25Q9UHL0 483 aaKnown RBP16.49■□□□□ 0.23
CHTOP-206ENST00000495554 MYMKA6NI61 221 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 GDF11O95390 407 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 SLFN13Q68D06 897 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 CENPPQ6IPU0 288 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 DEFB132Q7Z7B7 95 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 GMLQ99445 158 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 PSMD1Q99460 953 aa16.49■□□□□ 0.23
CHTOP-206ENST00000495554 NAP1L4Q99733 375 aaKnown RBP16.49■□□□□ 0.23
CHTOP-206ENST00000495554 EPN1Q9Y6I3 576 aaPredicted RBP16.49■□□□□ 0.23
CHTOP-206ENST00000495554 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 TMEM179Q6ZVK1 233 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 KRT222Q8N1A0 295 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 GPR161Q8N6U8 529 aaKnown RBP16.48■□□□□ 0.23
CHTOP-206ENST00000495554 RAD54LQ92698 747 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 SLC39A2Q9NP94 309 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 FAM53CQ9NYF3 392 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 CTAGE9A4FU28 777 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 NDUFA10O95299 355 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 SLC1A4P43007 532 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 MTIF2P46199 727 aaKnown RBP16.48■□□□□ 0.23
CHTOP-206ENST00000495554 TMEM119Q4V9L6 283 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
CHTOP-206ENST00000495554 DCAF4Q8WV16 495 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 CHP1Q99653 195 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
CHTOP-206ENST00000495554 F5H6K3 240 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 KIF20AO95235 890 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 TRIM21P19474 475 aaKnown RBP16.47■□□□□ 0.23
CHTOP-206ENST00000495554 ICA1Q05084 483 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 KLRC3Q07444 240 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 BMS1Q14692 1282 aaKnown RBP16.47■□□□□ 0.23
CHTOP-206ENST00000495554 ABCB5Q2M3G0 1257 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 QRICH1Q2TAL8 776 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
CHTOP-206ENST00000495554 EEF2KMTQ96G04 330 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 NOC4LQ9BVI4 516 aaKnown RBP16.47■□□□□ 0.23
CHTOP-206ENST00000495554 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 CDC23Q9UJX2 597 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
CHTOP-206ENST00000495554 COL4A5P29400 1685 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 RAD17O75943 681 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 VIL1P09327 827 aaKnown RBP16.47■□□□□ 0.23
CHTOP-206ENST00000495554 DPEP1P16444 411 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 ARHGAP25P42331 645 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 GUF1Q8N442 669 aaKnown RBP16.47■□□□□ 0.23
CHTOP-206ENST00000495554 RABGGTAQ92696 567 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 HAS1Q92839 578 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 HPS3Q969F9 1004 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 TTYH3Q9C0H2 523 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 PRDM16Q9HAZ2 1276 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 PCDHA12Q9UN75 941 aa16.47■□□□□ 0.23
CHTOP-206ENST00000495554 PSMD14O00487 310 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 RAD21O60216 631 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 MARCH6O60337 910 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.23
CHTOP-206ENST00000495554 PSMD2Q13200 908 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 MEA1Q16626 185 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 TMCO3Q6UWJ1 677 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 DYMQ7RTS9 669 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 GOLGA1Q92805 767 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 TRIM34Q9BYJ4 488 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
CHTOP-206ENST00000495554 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 FGFR1OPO95684 399 aaKnown RBP16.46■□□□□ 0.23
CHTOP-206ENST00000495554 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 KIF4BQ2VIQ3 1234 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 FIGNQ5HY92 759 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 MIIPQ5JXC2 388 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 FKBP15Q5T1M5 1219 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 DDX12PQ92771 950 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 IQCDQ96DY2 449 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 ERGIC2Q96RQ1 377 aa16.46■□□□□ 0.23
CHTOP-206ENST00000495554 PSME4Q14997 1843 aa16.46■□□□□ 0.22
CHTOP-206ENST00000495554 A0A1W2PRG0 241 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 GH2P01242 217 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 LRRC63Q05C16 580 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 TEX35Q5T0J7 233 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 WDR59Q6PJI9 974 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 SRGAP1Q7Z6B7 1085 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 SLC35F6Q8N357 371 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 CEP112Q8N8E3 955 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 CSRNP1Q96S65 589 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 NT5C3AQ9H0P0 336 aa16.45■□□□□ 0.22
CHTOP-206ENST00000495554 ZNHIT6Q9NWK9 470 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms