RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 NLRP10Q86W26 655 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 TEX2Q8IWB9 1127 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 ZC3H7AQ8IWR0 971 aaKnown RBP5.65□□□□□ -1.5
CD46-216ENST00000490278 PLEKHO2Q8TD55 490 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 SHISA4Q96DD7 197 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 TRMT2BQ96GJ1 504 aaKnown RBP5.65□□□□□ -1.5
CD46-216ENST00000490278 KIRREL1Q96J84 757 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 FMNL2Q96PY5 1086 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 TNPO3Q9Y5L0 923 aaKnown RBP5.65□□□□□ -1.5
CD46-216ENST00000490278 ANKRD62A6NC57 917 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 B4E1Z4 1266 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 FAM47E-STBD1D6RA91 191 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 BIN1O00499 593 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 PAX4O43316 350 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 OPA1O60313 960 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 MASP1P48740 699 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 GALK1P51570 392 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 FYB2Q5VWT5 728 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 SIRT2Q8IXJ6 389 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 PCDH19Q8TAB3 1148 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 RNF32Q9H0A6 362 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 IPPKQ9H8X2 491 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 PPARGC1AQ9UBK2 798 aaKnown RBP5.64□□□□□ -1.51
CD46-216ENST00000490278 FBLN5Q9UBX5 448 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 COA3Q9Y2R0 106 aaPredicted RBP5.64□□□□□ -1.51
CD46-216ENST00000490278 YBX2Q9Y2T7 364 aaKnown RBP5.64□□□□□ -1.51
CD46-216ENST00000490278 X6R8D5 127 aa5.64□□□□□ -1.51
CD46-216ENST00000490278 WNT9AO14904 365 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 MYCLP1P12525 358 aaPredicted RBP5.63□□□□□ -1.51
CD46-216ENST00000490278 FLT3P36888 993 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 BICRALQ6AI39 1079 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 CNNM4Q6P4Q7 775 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 CABP7Q86V35 215 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 LRRTM3Q86VH5 581 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 RIOX2Q8IUF8 465 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 JAM3Q9BX67 310 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 SPC25Q9HBM1 224 aa5.63□□□□□ -1.51
CD46-216ENST00000490278 A0A087X0B3 334 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 DNAJC6O75061 913 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 GLI4P10075 376 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 ZNF460Q14592 562 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 KCNMB1Q16558 191 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 FAM47CQ5HY64 1035 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 MROH9Q5TGP6 573 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 WWC2Q6AWC2 1192 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 ZCCHC8Q6NZY4 707 aaKnown RBP5.62□□□□□ -1.51
CD46-216ENST00000490278 UBE2R2Q712K3 238 aaPredicted RBP5.62□□□□□ -1.51
CD46-216ENST00000490278 FILIP1Q7Z7B0 1213 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 ZSWIM9Q86XI8 627 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 DDX1Q92499 740 aaKnown RBP5.62□□□□□ -1.51
CD46-216ENST00000490278 FBXW5Q969U6 566 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 KCNJ15Q99712 375 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 TARS2Q9BW92 718 aaKnown RBP5.62□□□□□ -1.51
CD46-216ENST00000490278 EPB41L1Q9H4G0 881 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 TNFRSF12AQ9NP84 129 aa5.62□□□□□ -1.51
CD46-216ENST00000490278 GSTA4O15217 222 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 SRGAP3O43295 1099 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 PDE8AO60658 829 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 DGKIO75912 1065 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 NPTXRO95502 500 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 NTRK1P04629 796 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 CKMP06732 381 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 GLI1P08151 1106 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 JMJD7P0C870 316 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 KCNA6P17658 529 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 POU3F2P20265 443 aaPredicted RBP5.61□□□□□ -1.51
CD46-216ENST00000490278 ERVFRD-1P60508 538 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 ST5P78524 1137 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 ABHD17CQ6PCB6 329 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 C16orf59Q7L2K0 433 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 DDX53Q86TM3 631 aaKnown RBP5.61□□□□□ -1.51
CD46-216ENST00000490278 THNSL2Q86YJ6 484 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 PPM1KQ8N3J5 372 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 NETO2Q8NC67 525 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 PANK1Q8TE04 598 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 INTS4Q96HW7 963 aaKnown RBP5.61□□□□□ -1.51
CD46-216ENST00000490278 SLC6A17Q9H1V8 727 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 IFT57Q9NWB7 429 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 MAPRE3Q9UPY8 281 aa5.61□□□□□ -1.51
CD46-216ENST00000490278 CCDC66A2RUB6 948 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 GSG1L2A8MUP6 293 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 PAPLNO95428 1278 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 CYBBP04839 570 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 MPOP05164 745 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 DBHP09172 617 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 PYGMP11217 842 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 GNAT1P11488 350 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 ITGB5P18084 799 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 NCLP19338 710 aaKnown RBP5.6□□□□□ -1.51
CD46-216ENST00000490278 DNM2P50570 870 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 NEK4P51957 841 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 SPIRE1Q08AE8 756 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 CFAP100Q494V2 611 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 ADGRF1Q5T601 910 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 PAQR3Q6TCH7 311 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 DCP2Q8IU60 420 aaKnown RBP5.6□□□□□ -1.51
CD46-216ENST00000490278 AHI1Q8N157 1196 aa5.6□□□□□ -1.51
CD46-216ENST00000490278 IGSF22Q8N9C0 903 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms