RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 RCSD1Q6JBY9 416 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 CCDC70Q6NSX1 233 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 WDR93Q6P2C0 686 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 MB21D1Q8N884 522 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 RNF26Q9BY78 433 aaPredicted RBP16.51■□□□□ 0.23
TTC3-219ENST00000485402 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 TCP10L2B9ZVM9 353 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 EBAG9O00559 213 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 ADAMTS3O15072 1205 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 RRP36Q96EU6 259 aaKnown RBP16.51■□□□□ 0.23
TTC3-219ENST00000485402 RUFY1Q96T51 708 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 EHD2Q9NZN4 543 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 HDAC9Q9UKV0 1011 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 ATP1A2P50993 1020 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 ATP2B2Q01814 1243 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 DLGAP5Q15398 846 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 SPON1Q9HCB6 807 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 DDTLA6NHG4 134 aaPredicted RBP16.5■□□□□ 0.23
TTC3-219ENST00000485402 VIL1P09327 827 aaKnown RBP16.5■□□□□ 0.23
TTC3-219ENST00000485402 MTIF2P46199 727 aaKnown RBP16.5■□□□□ 0.23
TTC3-219ENST00000485402 GNGT1P63211 74 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 HDLBPQ00341 1268 aaKnown RBP16.5■□□□□ 0.23
TTC3-219ENST00000485402 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 SCAF8Q9UPN6 1271 aaKnown RBP16.5■□□□□ 0.23
TTC3-219ENST00000485402 PHF20Q9BVI0 1012 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
TTC3-219ENST00000485402 RNASE9P60153 205 aaKnown RBP16.5■□□□□ 0.23
TTC3-219ENST00000485402 KRT83P78385 493 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 KIF5AQ12840 1032 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 CCDC181Q5TID7 509 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 ZNF658Q5TYW1 1059 aaPredicted RBP16.5■□□□□ 0.23
TTC3-219ENST00000485402 FAM198AQ9UFP1 575 aa16.5■□□□□ 0.23
TTC3-219ENST00000485402 ITIH6Q6UXX5 1313 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 CYLC1P35663 651 aaPredicted RBP16.49■□□□□ 0.23
TTC3-219ENST00000485402 MNAT1P51948 309 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 CKAP4Q07065 602 aaKnown RBP16.49■□□□□ 0.23
TTC3-219ENST00000485402 CIAPIN1Q6FI81 312 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 CSGALNACT2Q8N6G5 542 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 GPKOWQ92917 476 aaPredicted RBP eCLIP16.49■□□□□ 0.235e-8■■□□□ 11.4
TTC3-219ENST00000485402 CEP95Q96GE4 821 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 MRIQ9BWK5 157 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 FAM107BQ9H098 131 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 NHEJ1Q9H9Q4 299 aaPredicted RBP16.49■□□□□ 0.23
TTC3-219ENST00000485402 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 DMGDHQ9UI17 866 aaKnown RBP16.49■□□□□ 0.23
TTC3-219ENST00000485402 COL4A5P29400 1685 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 MYH1P12882 1939 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 KIAA1551Q9HCM1 1747 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 MYH8P13535 1937 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
TTC3-219ENST00000485402 MCM3P25205 808 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 TRIM14Q14142 442 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 CCDC178Q5BJE1 867 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 TYW1BQ6NUM6 668 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 CCNI2Q6ZMN8 369 aaPredicted RBP16.49■□□□□ 0.23
TTC3-219ENST00000485402 CCDC42Q96M95 316 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 LRRC1Q9BTT6 524 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 TMOD2Q9NZR1 351 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 SHTN1A0MZ66 631 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 H0YHG0 523 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 RAD21O60216 631 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 PRPF6O94906 941 aaKnown RBP16.49■□□□□ 0.23
TTC3-219ENST00000485402 AKR1B1P15121 316 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 SPA17Q15506 151 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 IL17AQ16552 155 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 FBXW10Q5XX13 1052 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 TADA2BQ86TJ2 420 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
TTC3-219ENST00000485402 ERLIN2O94905 339 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 CALM1P0DP23 149 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 CALM2P0DP24 149 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 CALM3P0DP25 149 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 UBA7P41226 1012 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 IRAK1P51617 712 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 ENOX2Q16206 610 aaKnown RBP16.48■□□□□ 0.23
TTC3-219ENST00000485402 IRF2BP1Q8IU81 584 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 TMEM47Q9BQJ4 181 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 MLXIPQ9HAP2 919 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 KCTD19Q17RG1 926 aaPredicted RBP16.48■□□□□ 0.23
TTC3-219ENST00000485402 CAPS2Q9BXY5 557 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 CENPHQ9H3R5 247 aa16.48■□□□□ 0.23
TTC3-219ENST00000485402 LRRC10BA6NIK2 292 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 H7C1D1 291 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 NEDD1Q8NHV4 660 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 TUBGCP2Q9BSJ2 902 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 FAM169AQ9Y6X4 670 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 CDK5RAP2Q96SN8 1893 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 DDAH1O94760 285 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 ARHGAP27Q6ZUM4 889 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
TTC3-219ENST00000485402 SECISBP2LQ93073 1101 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms