RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 TRPV6Q9H1D0 765 aa24.23■■□□□ 1.47
SREBF1-210ENST00000471445 HIPK3Q9H422 1215 aa24.23■■□□□ 1.47
SREBF1-210ENST00000471445 SLC12A7Q9Y666 1083 aa24.23■■□□□ 1.47
SREBF1-210ENST00000471445 UMODL1Q5DID0 1318 aa24.22■■□□□ 1.47
SREBF1-210ENST00000471445 RGS20O76081 388 aa24.22■■□□□ 1.47
SREBF1-210ENST00000471445 CSF2RAP15509 400 aa24.22■■□□□ 1.47
SREBF1-210ENST00000471445 CYP2C18P33260 490 aa24.22■■□□□ 1.47
SREBF1-210ENST00000471445 RASEFQ8IZ41 740 aa24.22■■□□□ 1.47
SREBF1-210ENST00000471445 SRBD1Q8N5C6 995 aaKnown RBP24.22■■□□□ 1.47
SREBF1-210ENST00000471445 AFG1LQ8WV93 481 aa24.22■■□□□ 1.47
SREBF1-210ENST00000471445 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.22■■□□□ 1.474e-9■■□□□ 11.8
SREBF1-210ENST00000471445 MTMR10Q9NXD2 777 aa24.22■■□□□ 1.47
SREBF1-210ENST00000471445 SEC63Q9UGP8 760 aaKnown RBP24.22■■□□□ 1.47
SREBF1-210ENST00000471445 MRVI1Q9Y6F6 885 aa24.22■■□□□ 1.47
SREBF1-210ENST00000471445 MYCLP12524 364 aaPredicted RBP24.21■■□□□ 1.47
SREBF1-210ENST00000471445 SMAD3P84022 425 aaKnown RBP24.21■■□□□ 1.47
SREBF1-210ENST00000471445 NFRKBQ6P4R8 1299 aa24.21■■□□□ 1.47
SREBF1-210ENST00000471445 VSIG10LQ86VR7 867 aa24.21■■□□□ 1.47
SREBF1-210ENST00000471445 FCHSD1Q86WN1 690 aa24.21■■□□□ 1.47
SREBF1-210ENST00000471445 RAB11FIP4Q86YS3 637 aa24.21■■□□□ 1.47
SREBF1-210ENST00000471445 DOCK5Q9H7D0 1870 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 CCND2P30279 289 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 NBPF20Q3BBV1 942 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 ADCK5Q3MIX3 580 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 TMTC3Q6ZXV5 915 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 C16orf59Q7L2K0 433 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 MICU3Q86XE3 530 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 WNT8AQ9H1J5 351 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 TRMT13Q9NUP7 481 aaKnown RBP24.2■■□□□ 1.46
SREBF1-210ENST00000471445 SCN5AQ14524 2016 aa24.2■■□□□ 1.46
SREBF1-210ENST00000471445 EXOSC10Q01780 885 aaKnown RBP24.19■■□□□ 1.46
SREBF1-210ENST00000471445 PTPN11Q06124 597 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-210ENST00000471445 KRT32Q14532 448 aa24.19■■□□□ 1.46
SREBF1-210ENST00000471445 TMEM240Q5SV17 173 aa24.19■■□□□ 1.46
SREBF1-210ENST00000471445 PSRC1Q6PGN9 363 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-210ENST00000471445 APOA5Q6Q788 366 aa24.19■■□□□ 1.46
SREBF1-210ENST00000471445 CMTR1Q8N1G2 835 aaKnown RBP24.19■■□□□ 1.46
SREBF1-210ENST00000471445 PIK3CDO00329 1044 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 SUPT20HL2P0C7V6 817 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 FAM47CQ5HY64 1035 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 ZNF697Q5TEC3 545 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 RASIP1Q5U651 963 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 KCNV1Q6PIU1 500 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 DHX32Q7L7V1 743 aaKnown RBP24.18■■□□□ 1.46
SREBF1-210ENST00000471445 FANCBQ8NB91 859 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 KCNB2Q92953 911 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 TCEANC2Q96MN5 208 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 IL23AQ9NPF7 189 aa24.18■■□□□ 1.46
SREBF1-210ENST00000471445 GBF1Q92538 1859 aa24.17■■□□□ 1.46
SREBF1-210ENST00000471445 CNTNAP5Q8WYK1 1306 aa24.17■■□□□ 1.46
SREBF1-210ENST00000471445 HOXD8P13378 290 aaPredicted RBP24.17■■□□□ 1.46
SREBF1-210ENST00000471445 CASTP20810 708 aaKnown RBP24.17■■□□□ 1.46
SREBF1-210ENST00000471445 LAMC2Q13753 1193 aa24.17■■□□□ 1.46
SREBF1-210ENST00000471445 PPTC7Q8NI37 304 aa24.17■■□□□ 1.46
SREBF1-210ENST00000471445 PPP1R13LQ8WUF5 828 aa24.17■■□□□ 1.46
SREBF1-210ENST00000471445 KAT2BQ92831 832 aa24.17■■□□□ 1.46
SREBF1-210ENST00000471445 MEIS2O14770 477 aa24.16■■□□□ 1.46
SREBF1-210ENST00000471445 ACRP10323 421 aa24.16■■□□□ 1.46
SREBF1-210ENST00000471445 CYP2C9P11712 490 aa24.16■■□□□ 1.46
SREBF1-210ENST00000471445 UBA1P22314 1058 aaKnown RBP24.16■■□□□ 1.46
SREBF1-210ENST00000471445 DGKDQ16760 1214 aa24.16■■□□□ 1.46
SREBF1-210ENST00000471445 SESTD1Q86VW0 696 aa24.16■■□□□ 1.46
SREBF1-210ENST00000471445 GUCD1Q96NT3 240 aa24.16■■□□□ 1.46
SREBF1-210ENST00000471445 TRIP12Q14669 1992 aaPredicted RBP24.16■■□□□ 1.46
SREBF1-210ENST00000471445 STAM2O75886 525 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 NEFLP07196 543 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 TGFB3P10600 412 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 CCL23P55773 120 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 MRPS9P82933 396 aaKnown RBP24.15■■□□□ 1.46
SREBF1-210ENST00000471445 CELF3Q5SZQ8 465 aaKnown RBP24.15■■□□□ 1.46
SREBF1-210ENST00000471445 MYSM1Q5VVJ2 828 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 USP17L6PQ6QN14 398 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 SYNE3Q6ZMZ3 975 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 ZNF365Q70YC5 407 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 DHX37Q8IY37 1157 aaKnown RBP24.15■■□□□ 1.46
SREBF1-210ENST00000471445 SMARCC2Q8TAQ2 1214 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 GPKOWQ92917 476 aaPredicted RBP eCLIP24.15■■□□□ 1.464e-7■□□□□ 8.7
SREBF1-210ENST00000471445 CUL5Q93034 780 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 ZFP91Q96JP5 570 aaPredicted RBP24.15■■□□□ 1.46
SREBF1-210ENST00000471445 INPP4AQ96PE3 977 aaPredicted RBP24.15■■□□□ 1.46
SREBF1-210ENST00000471445 RBM28Q9NW13 759 aaKnown RBP24.15■■□□□ 1.46
SREBF1-210ENST00000471445 BRPF3Q9ULD4 1205 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 STXBP5LQ9Y2K9 1186 aa24.15■■□□□ 1.46
SREBF1-210ENST00000471445 GGPS1O95749 300 aa24.14■■□□□ 1.45
SREBF1-210ENST00000471445 F2P00734 622 aa24.14■■□□□ 1.45
SREBF1-210ENST00000471445 HMGB1P09429 215 aaKnown RBP24.14■■□□□ 1.45
SREBF1-210ENST00000471445 ICAM3P32942 547 aa24.14■■□□□ 1.45
SREBF1-210ENST00000471445 HSPA4P34932 840 aa24.14■■□□□ 1.45
SREBF1-210ENST00000471445 TMEM265A0A087WTH1 108 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.13■■□□□ 1.45
SREBF1-210ENST00000471445 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.13■■□□□ 1.45
SREBF1-210ENST00000471445 hCG_1642624A0A1W2PR95 340 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 ZBTB43O43298 467 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 SP2Q02086 613 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 GNPTABQ3T906 1256 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 HERVK_113Q902F9 699 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 VWCEQ96DN2 955 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 SCLYQ96I15 445 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 KATNAL1Q9BW62 490 aa24.13■■□□□ 1.45
SREBF1-210ENST00000471445 HAS3O00219 553 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms