RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 IBSPP21815 317 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-205ENST00000469043 DNAJA1P31689 397 aaKnown RBP6.34□□□□□ -1.39
SCFD1-205ENST00000469043 ADAM17P78536 824 aa6.34□□□□□ -1.39
SCFD1-205ENST00000469043 SMAD4Q13485 552 aaKnown RBP6.34□□□□□ -1.39
SCFD1-205ENST00000469043 PWP2Q15269 919 aaKnown RBP6.34□□□□□ -1.39
SCFD1-205ENST00000469043 CCDC81Q6ZN84 652 aa6.34□□□□□ -1.39
SCFD1-205ENST00000469043 LINC00482Q8N8I6 264 aa6.34□□□□□ -1.39
SCFD1-205ENST00000469043 ADAMTS17Q8TE56 1095 aa6.34□□□□□ -1.39
SCFD1-205ENST00000469043 FBLN5Q9UBX5 448 aa6.34□□□□□ -1.39
SCFD1-205ENST00000469043 CGGBP1Q9UFW8 167 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-205ENST00000469043 DDX41Q9UJV9 622 aaKnown RBP6.34□□□□□ -1.39
SCFD1-205ENST00000469043 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
SCFD1-205ENST00000469043 NTRK1P04629 796 aa6.33□□□□□ -1.4
SCFD1-205ENST00000469043 FAM124AQ86V42 546 aa6.33□□□□□ -1.4
SCFD1-205ENST00000469043 ZNF654Q8IZM8 581 aa6.33□□□□□ -1.4
SCFD1-205ENST00000469043 C19orf47Q8N9M1 422 aaKnown RBP6.33□□□□□ -1.4
SCFD1-205ENST00000469043 LOXL4Q96JB6 756 aa6.33□□□□□ -1.4
SCFD1-205ENST00000469043 RBM15Q96T37 977 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCFD1-205ENST00000469043 GMLQ99445 158 aa6.33□□□□□ -1.4
SCFD1-205ENST00000469043 AP5M1Q9H0R1 490 aa6.33□□□□□ -1.4
SCFD1-205ENST00000469043 GINM1Q9NU53 330 aa6.33□□□□□ -1.4
SCFD1-205ENST00000469043 A0A1W2PQH9 124 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 C7orf72A4D263 438 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 RACK1P63244 317 aaKnown RBP6.32□□□□□ -1.4
SCFD1-205ENST00000469043 RBL2Q08999 1139 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 SOGA3Q5TF21 947 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 CPZQ66K79 652 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 DCP2Q8IU60 420 aaKnown RBP6.32□□□□□ -1.4
SCFD1-205ENST00000469043 LGI4Q8N135 537 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 SAMD11Q96NU1 681 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 MYH16Q9H6N6 1097 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 KLHL42Q9P2K6 505 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 AKT3Q9Y243 479 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 EFR3BQ9Y2G0 817 aa6.32□□□□□ -1.4
SCFD1-205ENST00000469043 TPD52L2O43399 206 aaKnown RBP6.31□□□□□ -1.4
SCFD1-205ENST00000469043 PLATP00750 562 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 RPL13P26373 211 aaKnown RBP6.31□□□□□ -1.4
SCFD1-205ENST00000469043 GIPRP48546 466 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 ANAPC15P60006 121 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 PAK2Q13177 524 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 PPP2R5EQ16537 467 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 RGL3Q3MIN7 710 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 CCDC181Q5TID7 509 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 BORAQ6PGQ7 559 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 TMED8Q6PL24 325 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-205ENST00000469043 ETV3LQ6ZN32 361 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 CRACR2BQ8N4Y2 399 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-205ENST00000469043 TTC9BQ8N6N2 239 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 TTLL6Q8N841 843 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 KYQ8NBH2 561 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 GORASP1Q9BQQ3 440 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 C11orf84Q9BUA3 381 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-205ENST00000469043 SLC52A1Q9NWF4 448 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-205ENST00000469043 SIT1Q9Y3P8 196 aa6.31□□□□□ -1.4
SCFD1-205ENST00000469043 ANKRD34BA5PLL1 514 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 CLSTN1O94985 981 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 SOX9P48436 509 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 ZXDAP98168 799 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 ARID5AQ03989 594 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 FAM26FQ5R3K3 315 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 POMZP3Q6PJE2 187 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 CD300LDQ6UXZ3 194 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 ZC3H18Q86VM9 953 aaKnown RBP6.3□□□□□ -1.4
SCFD1-205ENST00000469043 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 MMP19Q99542 508 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 APBA2Q99767 749 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 CLEC1BQ9P126 229 aa6.3□□□□□ -1.4
SCFD1-205ENST00000469043 ZNF536O15090 1300 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 MROH6A6NGR9 719 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 C8BP07358 591 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 THBS2P35442 1172 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 TBC1D10BQ4KMP7 808 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-205ENST00000469043 GORABQ5T7V8 394 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 KIAA1211LQ6NV74 962 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 TICAM2Q86XR7 235 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 PLEKHO2Q8TD55 490 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 KLHL6Q8WZ60 621 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 OSBPL2Q9H1P3 480 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 NGRNQ9NPE2 291 aaKnown RBP6.29□□□□□ -1.4
SCFD1-205ENST00000469043 MARCH2Q9P0N8 246 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 INPP5FQ9Y2H2 1132 aa6.29□□□□□ -1.4
SCFD1-205ENST00000469043 NOP58Q9Y2X3 529 aaKnown RBP6.29□□□□□ -1.4
SCFD1-205ENST00000469043 NOP56O00567 594 aaKnown RBP6.28□□□□□ -1.4
SCFD1-205ENST00000469043 KCNH1O95259 989 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 NAT2P11245 290 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 PLS3P13797 630 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 TNFRSF1AP19438 455 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 BMS1Q14692 1282 aaKnown RBP6.28□□□□□ -1.4
SCFD1-205ENST00000469043 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-205ENST00000469043 MCTP2Q6DN12 878 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 GLB1LQ6UWU2 654 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 JAZF1Q86VZ6 243 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 ZCRB1Q8TBF4 217 aaKnown RBP6.28□□□□□ -1.4
SCFD1-205ENST00000469043 CPLX3Q8WVH0 158 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 SEC14L1Q92503 715 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 COPS5Q92905 334 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 C1QTNF3Q9BXJ4 246 aa6.28□□□□□ -1.4
SCFD1-205ENST00000469043 BRINP2Q9C0B6 783 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms