RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 PDE4DQ08499 809 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 C9orf50Q5SZB4 431 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 ARHGEF16Q5VV41 709 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 NECAB1Q8N987 351 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 FERMT2Q96AC1 680 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 TOX2Q96NM4 488 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 IWS1Q96ST2 819 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 VTA1Q9NP79 307 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 PRDM5Q9NQX1 630 aaPredicted RBP20.37■□□□□ 0.85
SF1-212ENST00000463343 PXMP2Q9NR77 195 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 TMEM265A0A087WTH1 108 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 B4DLN1 442 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 hCG_1984214I3L0E3 225 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 ADCY6O43306 1168 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 NR3C2P08235 984 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 EIF2AK2P19525 551 aaKnown RBP20.36■□□□□ 0.85
SF1-212ENST00000463343 MRPL12P52815 198 aaKnown RBP20.36■□□□□ 0.85
SF1-212ENST00000463343 NAPAP54920 295 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 AKAP17AQ02040 695 aaKnown RBP20.36■□□□□ 0.85
SF1-212ENST00000463343 SSRP1Q08945 709 aaKnown RBP20.36■□□□□ 0.85
SF1-212ENST00000463343 SH3RF1Q7Z6J0 888 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 FBXO16Q8IX29 292 aaPredicted RBP20.36■□□□□ 0.85
SF1-212ENST00000463343 ZNF713Q8N859 430 aaPredicted RBP20.36■□□□□ 0.85
SF1-212ENST00000463343 SMARCC2Q8TAQ2 1214 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 CUL5Q93034 780 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 MPHOSPH6Q99547 160 aaKnown RBP20.36■□□□□ 0.85
SF1-212ENST00000463343 PDCD2LQ9BRP1 358 aa20.36■□□□□ 0.85
SF1-212ENST00000463343 DTNBO60941 627 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 CTDNEP1O95476 244 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 MYCNP04198 464 aaPredicted RBP20.35■□□□□ 0.85
SF1-212ENST00000463343 CLTBP09497 229 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 RABEP1Q15276 862 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 TMEM63BQ5T3F8 832 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 IQSEC1Q6DN90 963 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 PPP1R18Q6NYC8 613 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 CPLX2Q6PUV4 134 aaKnown RBP20.35■□□□□ 0.85
SF1-212ENST00000463343 ANKRD33Q7Z3H0 272 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 LENG1Q96BZ8 264 aaPredicted RBP20.35■□□□□ 0.85
SF1-212ENST00000463343 CDX2Q99626 313 aaPredicted RBP20.35■□□□□ 0.85
SF1-212ENST00000463343 COL25A1Q9BXS0 654 aaPredicted RBP20.35■□□□□ 0.85
SF1-212ENST00000463343 RIC8AQ9NPQ8 531 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 LIMCH1Q9UPQ0 1083 aa20.35■□□□□ 0.85
SF1-212ENST00000463343 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.34■□□□□ 0.85
SF1-212ENST00000463343 RBM47A0AV96 593 aaKnown RBP20.34■□□□□ 0.85
SF1-212ENST00000463343 SMCO2A6NFE2 343 aa20.34■□□□□ 0.85
SF1-212ENST00000463343 ADAMTS4O75173 837 aa20.34■□□□□ 0.85
SF1-212ENST00000463343 TNFAIP2Q03169 654 aa20.34■□□□□ 0.85
SF1-212ENST00000463343 STXBP2Q15833 593 aa20.34■□□□□ 0.85
SF1-212ENST00000463343 UBE2SQ16763 222 aa20.34■□□□□ 0.85
SF1-212ENST00000463343 VSIG10LQ86VR7 867 aa20.34■□□□□ 0.85
SF1-212ENST00000463343 TRIM22Q8IYM9 498 aa20.34■□□□□ 0.85
SF1-212ENST00000463343 A0A1W2PQ45 241 aaPredicted RBP20.33■□□□□ 0.85
SF1-212ENST00000463343 A0A1W2PQY0 241 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 MOXD2PA6NHM9 499 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 DUSP11O75319 330 aaKnown RBP20.33■□□□□ 0.85
SF1-212ENST00000463343 PGK1P00558 417 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 SMPD1P17405 629 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 PGM5Q15124 567 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 KLHDC9Q8NEP7 349 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 IL31RAQ8NI17 732 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 GTF3C6Q969F1 213 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 FAM161BQ96MY7 647 aa20.33■□□□□ 0.85
SF1-212ENST00000463343 ADAMTS3O15072 1205 aa20.32■□□□□ 0.84
SF1-212ENST00000463343 EIF3JO75822 258 aaKnown RBP20.32■□□□□ 0.84
SF1-212ENST00000463343 DEXIO95424 95 aa20.32■□□□□ 0.84
SF1-212ENST00000463343 MYCLP12524 364 aaPredicted RBP20.32■□□□□ 0.84
SF1-212ENST00000463343 ADCY7P51828 1080 aa20.32■□□□□ 0.84
SF1-212ENST00000463343 GNEQ9Y223 722 aaKnown RBP20.32■□□□□ 0.84
SF1-212ENST00000463343 FRMPD4Q14CM0 1322 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 CDKL5O76039 1030 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 RAG1P15918 1043 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 PTGS1P23219 599 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 ITGB8P26012 769 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 ACLYP53396 1101 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 ST3GAL1Q11201 340 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 CCSAPQ6IQ19 270 aaPredicted RBP20.31■□□□□ 0.84
SF1-212ENST00000463343 ZFP91Q96JP5 570 aaPredicted RBP20.31■□□□□ 0.84
SF1-212ENST00000463343 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 WDR11Q9BZH6 1224 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 ZMYND12Q9H0C1 365 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 VPS54Q9P1Q0 977 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 PCDHA6Q9UN73 950 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 PCDHA8Q9Y5H6 950 aa20.31■□□□□ 0.84
SF1-212ENST00000463343 ELP1O95163 1332 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 ESYT2A0FGR8 921 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 DCDC2CA8MYV0 355 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 RGS20O76081 388 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 CST5P28325 142 aaPredicted RBP20.3■□□□□ 0.84
SF1-212ENST00000463343 CCND2P30279 289 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 IRX5P78411 483 aaPredicted RBP20.3■□□□□ 0.84
SF1-212ENST00000463343 DUSP28Q4G0W2 176 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 CCDC62Q6P9F0 684 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 SEPT14Q6ZU15 432 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 TEX2Q8IWB9 1127 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 SCFD2Q8WU76 684 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 ZSCAN31Q96LW9 406 aaPredicted RBP20.3■□□□□ 0.84
SF1-212ENST00000463343 GLT8D2Q9H1C3 349 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 UPF3AQ9H1J1 476 aaKnown RBP20.3■□□□□ 0.84
SF1-212ENST00000463343 TTYH1Q9H313 450 aaPredicted RBP20.3■□□□□ 0.84
SF1-212ENST00000463343 SH3GLB2Q9NR46 395 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms