RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 USP17L6PQ6QN14 398 aa20.75■□□□□ 0.91
LINC00960-201ENST00000463183 BLOC1S2Q6QNY1 142 aa20.75■□□□□ 0.91
LINC00960-201ENST00000463183 Q6ZUG5 572 aa20.75■□□□□ 0.91
LINC00960-201ENST00000463183 HEATR3Q7Z4Q2 680 aa20.75■□□□□ 0.91
LINC00960-201ENST00000463183 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.91
LINC00960-201ENST00000463183 CUL5Q93034 780 aa20.75■□□□□ 0.91
LINC00960-201ENST00000463183 MAP3K20Q9NYL2 800 aaKnown RBP20.75■□□□□ 0.91
LINC00960-201ENST00000463183 KIAA0355O15063 1070 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 GH1P01241 217 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 SMARCA1P28370 1054 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 GHRHRQ02643 423 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 APOBRQ0VD83 1088 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 ERICH6BQ5W0A0 696 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 CCDC62Q6P9F0 684 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 FAM126BQ8IXS8 530 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 AFG1LQ8WV93 481 aa20.74■□□□□ 0.91
LINC00960-201ENST00000463183 LTBP2Q14767 1821 aa20.73■□□□□ 0.91
LINC00960-201ENST00000463183 GRIN2DO15399 1336 aa20.73■□□□□ 0.91
LINC00960-201ENST00000463183 CASTP20810 708 aaKnown RBP20.73■□□□□ 0.91
LINC00960-201ENST00000463183 CCND2P30279 289 aa20.73■□□□□ 0.91
LINC00960-201ENST00000463183 PURAQ00577 322 aaKnown RBP20.73■□□□□ 0.91
LINC00960-201ENST00000463183 BRF1Q92994 677 aa20.73■□□□□ 0.91
LINC00960-201ENST00000463183 MTG1Q9BT17 334 aaPredicted RBP20.73■□□□□ 0.91
LINC00960-201ENST00000463183 TRPV6Q9H1D0 765 aa20.73■□□□□ 0.91
LINC00960-201ENST00000463183 RBM28Q9NW13 759 aaKnown RBP20.73■□□□□ 0.91
LINC00960-201ENST00000463183 C9orf50Q5SZB4 431 aa20.72■□□□□ 0.91
LINC00960-201ENST00000463183 SAMD3Q8N6K7 520 aa20.72■□□□□ 0.91
LINC00960-201ENST00000463183 DDX41Q9UJV9 622 aaKnown RBP20.72■□□□□ 0.91
LINC00960-201ENST00000463183 TBX21Q9UL17 535 aa20.72■□□□□ 0.91
LINC00960-201ENST00000463183 CNTNAP5Q8WYK1 1306 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 A6NJR5 290 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 FPGSQ05932 587 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 ARHGAP1Q07960 439 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 SHHQ15465 462 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 UBE2SQ16763 222 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 VSIG10LQ86VR7 867 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 DHX37Q8IY37 1157 aaKnown RBP20.71■□□□□ 0.91
LINC00960-201ENST00000463183 KCNB2Q92953 911 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 PSTPIP2Q9H939 334 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 RTEL1Q9NZ71 1219 aa20.71■□□□□ 0.91
LINC00960-201ENST00000463183 B4GALT4O60513 344 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 RGS20O76081 388 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 TIMP1P01033 207 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 MMP3P08254 477 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 RPS6KB1P23443 525 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 PSMA5P28066 241 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 CDC27P30260 824 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 METAP2P50579 478 aaKnown RBP eCLIP20.7■□□□□ 0.9
LINC00960-201ENST00000463183 NBPF20Q3BBV1 942 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 SLC43A3Q8NBI5 491 aa20.7■□□□□ 0.9
LINC00960-201ENST00000463183 TRMT13Q9NUP7 481 aaKnown RBP20.7■□□□□ 0.9
LINC00960-201ENST00000463183 V9GY48 417 aaPredicted RBP20.7■□□□□ 0.9
LINC00960-201ENST00000463183 CYP2C18P33260 490 aa20.69■□□□□ 0.9
LINC00960-201ENST00000463183 EPHB4P54760 987 aa20.69■□□□□ 0.9
LINC00960-201ENST00000463183 ALDH8A1Q9H2A2 487 aaPredicted RBP20.69■□□□□ 0.9
LINC00960-201ENST00000463183 KIAA1217Q5T5P2 1943 aa20.69■□□□□ 0.9
LINC00960-201ENST00000463183 MEIS2O14770 477 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 PPFIA3O75145 1194 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 GGPS1O95749 300 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 CD4P01730 458 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 ADD1P35611 737 aaKnown RBP20.68■□□□□ 0.9
LINC00960-201ENST00000463183 NAPAP54920 295 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 LRIT3Q3SXY7 679 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 WWC2Q6AWC2 1192 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 HIPK3Q9H422 1215 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 UMODL1Q5DID0 1318 aa20.68■□□□□ 0.9
LINC00960-201ENST00000463183 KPNA6O60684 536 aa20.67■□□□□ 0.9
LINC00960-201ENST00000463183 ZNF286BP0CG31 522 aa20.67■□□□□ 0.9
LINC00960-201ENST00000463183 CYP2C9P11712 490 aa20.67■□□□□ 0.9
LINC00960-201ENST00000463183 UBA1P22314 1058 aaKnown RBP20.67■□□□□ 0.9
LINC00960-201ENST00000463183 CCL23P55773 120 aa20.67■□□□□ 0.9
LINC00960-201ENST00000463183 MRPS9P82933 396 aaKnown RBP20.67■□□□□ 0.9
LINC00960-201ENST00000463183 LAMC2Q13753 1193 aa20.67■□□□□ 0.9
LINC00960-201ENST00000463183 GNPTABQ3T906 1256 aa20.67■□□□□ 0.9
LINC00960-201ENST00000463183 RNPC3Q96LT9 517 aaKnown RBP20.67■□□□□ 0.9
LINC00960-201ENST00000463183 SPATA33Q96N06 139 aa20.67■□□□□ 0.9
LINC00960-201ENST00000463183 MLXIPQ9HAP2 919 aa20.67■□□□□ 0.9
LINC00960-201ENST00000463183 SPDYE3A6NKU9 549 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 ACRP10323 421 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 CSF2RAP15509 400 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 SP2Q02086 613 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 DGKDQ16760 1214 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 MFSD5Q6N075 450 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 KCNV1Q6PIU1 500 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 TMEM199Q8N511 208 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 ALG1Q9BT22 464 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 USP26Q9BXU7 913 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 UPF3BQ9BZI7 483 aaKnown RBP20.66■□□□□ 0.9
LINC00960-201ENST00000463183 FAM217BQ9NTX9 383 aaPredicted RBP20.66■□□□□ 0.9
LINC00960-201ENST00000463183 NOD1Q9Y239 953 aa20.66■□□□□ 0.9
LINC00960-201ENST00000463183 LAMA2P24043 3122 aaKnown RBP20.66■□□□□ 0.9
LINC00960-201ENST00000463183 PIK3CDO00329 1044 aa20.65■□□□□ 0.9
LINC00960-201ENST00000463183 SP4Q02446 784 aa20.65■□□□□ 0.9
LINC00960-201ENST00000463183 CELF3Q5SZQ8 465 aaKnown RBP20.65■□□□□ 0.9
LINC00960-201ENST00000463183 PGBD1Q96JS3 809 aa20.65■□□□□ 0.9
LINC00960-201ENST00000463183 LARP6Q9BRS8 491 aaKnown RBP20.65■□□□□ 0.9
LINC00960-201ENST00000463183 SEZ6LQ9BYH1 1024 aa20.65■□□□□ 0.9
LINC00960-201ENST00000463183 BCAS3Q9H6U6 928 aa20.65■□□□□ 0.9
LINC00960-201ENST00000463183 CCT2P78371 535 aaKnown RBP20.64■□□□□ 0.89
LINC00960-201ENST00000463183 FUT2Q10981 343 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms