RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 PI4K2BQ8TCG2 481 aa20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 FBXL18Q96ME1 805 aa20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 TMEM47Q9BQJ4 181 aa20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 ANAPC4Q9UJX5 808 aa20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 MICAL3Q7RTP6 2002 aa20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 ORC4O43929 436 aa20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 PARNO95453 639 aaKnown RBP20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 VPS53Q5VIR6 699 aa20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 ANKS1AQ92625 1134 aa20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 GPATCH3Q96I76 525 aa20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 UIMC1Q96RL1 719 aa20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 HDAC6Q9UBN7 1215 aa20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 WDR19Q8NEZ3 1342 aa20.26■□□□□ 0.83
UBE2D4-209ENST00000454428 ATG2AQ2TAZ0 1938 aa20.25■□□□□ 0.83
UBE2D4-209ENST00000454428 H3BQ06 376 aaPredicted RBP20.25■□□□□ 0.83
UBE2D4-209ENST00000454428 PDHBP11177 359 aa20.25■□□□□ 0.83
UBE2D4-209ENST00000454428 HIC1Q14526 733 aa20.25■□□□□ 0.83
UBE2D4-209ENST00000454428 FBXO22Q8NEZ5 403 aa20.25■□□□□ 0.83
UBE2D4-209ENST00000454428 SP7Q8TDD2 431 aaPredicted RBP20.25■□□□□ 0.83
UBE2D4-209ENST00000454428 DCTPP1Q9H773 170 aa20.25■□□□□ 0.83
UBE2D4-209ENST00000454428 GH1P01241 217 aa20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 TOP1P11387 765 aaKnown RBP20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 HTRA4P83105 476 aaPredicted RBP20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 IKBKEQ14164 716 aa20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 COL19A1Q14993 1142 aa20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 ZNF618Q5T7W0 954 aa20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 TBC1D5Q92609 795 aa20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 MRPL38Q96DV4 380 aaKnown RBP20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 MPHOSPH6Q99547 160 aaKnown RBP20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 COL20A1Q9P218 1284 aa20.24■□□□□ 0.83
UBE2D4-209ENST00000454428 HAS3O00219 553 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 DCXO43602 365 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 EFCAB14O75071 495 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 ZNF200P98182 395 aaPredicted RBP20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 ZP2Q05996 745 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 ZNF543Q08ER8 600 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 SEPT14Q6ZU15 432 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 RGS22Q8NE09 1264 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 OTUD7AQ8TE49 926 aaPredicted RBP20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 FSD1Q9BTV5 496 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 MYO7AQ13402 2215 aa20.23■□□□□ 0.83
UBE2D4-209ENST00000454428 C19orf67A6NJJ6 358 aa20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 SNHG28P0DPA3 235 aa20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 CASTP20810 708 aaKnown RBP20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 PSEN2P49810 448 aa20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 PTK7Q13308 1070 aa20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 PUS10Q3MIT2 529 aaKnown RBP20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 CHST3Q7LGC8 479 aa20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 TAAR1Q96RJ0 339 aa20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 CHMP4BQ9H444 224 aaKnown RBP20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 TCP11L1Q9NUJ3 509 aa20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 NLRC5Q86WI3 1866 aa20.22■□□□□ 0.83
UBE2D4-209ENST00000454428 MYH7BA7E2Y1 1941 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 LGR5O75473 907 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 F2P00734 622 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 CSPP1Q1MSJ5 1256 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 EPC2Q52LR7 807 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 C7orf31Q8N865 590 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 EMID1Q96A84 441 aaPredicted RBP20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 ALG1Q9BT22 464 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 KCNH6Q9H252 994 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 DDX41Q9UJV9 622 aaKnown RBP20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 CFAP54Q96N23 3096 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 MYO15AQ9UKN7 3530 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 TTC41PQ6P2S7 1318 aa20.21■□□□□ 0.83
UBE2D4-209ENST00000454428 COL4A6Q14031 1691 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 ZNF286BP0CG31 522 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 MFSD10Q14728 455 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 DGKDQ16760 1214 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 USH1GQ495M9 461 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 TCEAL5Q5H9L2 206 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 HFE2Q6ZVN8 426 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 DBF4BQ8NFT6 615 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 SYTL5Q8TDW5 730 aaPredicted RBP20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 PABPC5Q96DU9 382 aaKnown RBP20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 CRBNQ96SW2 442 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 CPVLQ9H3G5 476 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 PNMA2Q9UL42 364 aa20.2■□□□□ 0.82
UBE2D4-209ENST00000454428 B4DLN1 442 aa20.19■□□□□ 0.82
UBE2D4-209ENST00000454428 H3BNC9 293 aa20.19■□□□□ 0.82
UBE2D4-209ENST00000454428 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
UBE2D4-209ENST00000454428 KIAA0753Q2KHM9 967 aa20.19■□□□□ 0.82
UBE2D4-209ENST00000454428 BANK1Q8NDB2 785 aa20.19■□□□□ 0.82
UBE2D4-209ENST00000454428 OSBPL7Q9BZF2 842 aa20.19■□□□□ 0.82
UBE2D4-209ENST00000454428 HOXD8P13378 290 aaPredicted RBP20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 LTBRP36941 435 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 ALX1Q15699 326 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 PTPROQ16827 1216 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 TIGD5Q53EQ6 642 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 PLEKHG4Q58EX7 1191 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 RRP12Q5JTH9 1297 aaKnown RBP20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 MYOCDQ8IZQ8 938 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 PRKAG3Q9UGI9 489 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 CTNNA3Q9UI47 895 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 TECTAO75443 2155 aa20.18■□□□□ 0.82
UBE2D4-209ENST00000454428 DMDP11532 3685 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 AMHP03971 560 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms