RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 ASRGL1Q7L266 308 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 APTXQ7Z2E3 356 aaKnown RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 DHTKD1Q96HY7 919 aaPredicted RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 ZMAT2Q96NC0 199 aaKnown RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 ZNF317Q96PQ6 595 aaPredicted RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 XPO6Q96QU8 1125 aaKnown RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 ESF1Q9H501 851 aaKnown RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 QPCTLQ9NXS2 382 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 REXO2Q9Y3B8 237 aaKnown RBP11.76□□□□□ -0.53
LINC00342-202ENST00000448494 AGLP35573 1532 aa11.76□□□□□ -0.53
LINC00342-202ENST00000448494 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 HIP1O00291 1037 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 ZNF185O15231 689 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 TEX33O43247 280 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 KRT86O43790 486 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 ALDH2P05091 517 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 PDE1BQ01064 536 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 PNOCQ13519 176 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 BCL2A1Q16548 175 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 CCDC122Q5T0U0 273 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 C8orf74Q6P047 294 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 SNX12Q9UMY4 172 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 MROH7Q68CQ1 1323 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 BTBD19C9JJ37 291 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 SEMA3EO15041 775 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 AKR1B10O60218 316 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 UBOX5O94941 541 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 TPBGLP0DKB5 382 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 PORP16435 677 aaPredicted RBP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 KCNA3P22001 575 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 SKIV2L2P42285 1042 aaKnown RBP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 CLCN2P51788 898 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 GEMIN4P57678 1058 aaKnown RBP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 KRT83P78385 493 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 GUCY2DQ02846 1103 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 TMEM259Q4ZIN3 620 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 DUS1LQ6P1R4 473 aaKnown RBP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 OTUD6AQ7L8S5 288 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 EIF1ADQ8N9N8 165 aaKnown RBP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 HAUS1Q96CS2 278 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 TCEANC2Q96MN5 208 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 TRIM10Q9UDY6 481 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 ADD3Q9UEY8 706 aaKnown RBP11.75□□□□□ -0.53
LINC00342-202ENST00000448494 TSKSQ9UJT2 592 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
LINC00342-202ENST00000448494 ABCC1P33527 1531 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 TBC1D12O60347 775 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 TJP3O95049 919 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 CHGBP05060 677 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 SKIP12755 728 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 IDEP14735 1019 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 ERCC5P28715 1186 aaPredicted RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 CDC27P30260 824 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 FMR1Q06787 632 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 NSUN2Q08J23 767 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 GSTA3Q16772 222 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 HSP90AA4PQ58FG1 418 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 ODF2Q5BJF6 829 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 TCERG1LQ5VWI1 586 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 GRAMD4Q6IC98 578 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 C3orf62Q6ZUJ4 267 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 SCUBE1Q8IWY4 988 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 KRI1Q8N9T8 703 aaKnown RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 SREK1Q8WXA9 508 aaKnown RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 NACC2Q96BF6 587 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 PBKQ96KB5 322 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 SH3GL1Q99961 368 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 CENPKQ9BS16 269 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 OSBPL10Q9BXB5 764 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 NSRP1Q9H0G5 558 aaKnown RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 IL1RAPL2Q9NP60 686 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 JADE2Q9NQC1 790 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 LNPEPQ9UIQ6 1025 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 N6AMT1Q9Y5N5 214 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 C3P01024 1663 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 ARHGEF10O15013 1369 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 ANKRD26Q9UPS8 1709 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 MYPNQ86TC9 1320 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 PTPDC1A2A3K4 754 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 WNT7AO00755 349 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 BMP6P22004 513 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 SARSP49591 514 aaKnown RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 CCT8P50990 548 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 KPNB1Q14974 876 aaKnown RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 TRIML1Q8N9V2 468 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 ANKK1Q8NFD2 765 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 DQX1Q8TE96 717 aaKnown RBP11.74□□□□□ -0.53
LINC00342-202ENST00000448494 UCMAQ8WVF2 138 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 IFT81Q8WYA0 676 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 GATA6Q92908 595 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
LINC00342-202ENST00000448494 TUBGCP5Q96RT8 1024 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms