RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 FGD4Q96M96 766 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 GBP4Q96PP9 640 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 UBIAD1Q9Y5Z9 338 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 MGAMO43451 1857 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 ASTN1O14525 1302 aa14.41□□□□□ -0.1
SCLT1-202ENST00000439369 MEIS1O00470 390 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 TBX3O15119 743 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 EDIL3O43854 480 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 NEMFO60524 1076 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 CCNT1O60563 726 aaKnown RBP14.4□□□□□ -0.1
SCLT1-202ENST00000439369 ZNF76P36508 570 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 PDE4DQ08499 809 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 SLC39A14Q15043 492 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 CSPP1Q1MSJ5 1256 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 FAM173BQ6P4H8 233 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 IL31RAQ8NI17 732 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 KCNG4Q8TDN1 519 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 GPRASP2Q96D09 838 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 MAML3Q96JK9 1138 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 INPP4AQ96PE3 977 aaPredicted RBP14.4□□□□□ -0.1
SCLT1-202ENST00000439369 USP28Q96RU2 1077 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 MXRA8Q9BRK3 442 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 DDX25Q9UHL0 483 aaKnown RBP14.4□□□□□ -0.1
SCLT1-202ENST00000439369 PCDHB6Q9Y5E3 794 aa14.4□□□□□ -0.1
SCLT1-202ENST00000439369 IGLV3-22A0A075B6J6 115 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 CTGFP29279 349 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 PRPHP41219 470 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 MRPS9P82933 396 aaKnown RBP14.39□□□□□ -0.11
SCLT1-202ENST00000439369 ATP2C1P98194 919 aaPredicted RBP14.39□□□□□ -0.11
SCLT1-202ENST00000439369 SF3A1Q15459 793 aaKnown RBP14.39□□□□□ -0.11
SCLT1-202ENST00000439369 GNPTABQ3T906 1256 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 ARL6IP4Q66PJ3 421 aaKnown RBP14.39□□□□□ -0.11
SCLT1-202ENST00000439369 NLRX1Q86UT6 975 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 CD99L2Q8TCZ2 262 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 ZNF296Q8WUU4 475 aaPredicted RBP14.39□□□□□ -0.11
SCLT1-202ENST00000439369 FAM20AQ96MK3 541 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 PURBQ96QR8 312 aaKnown RBP14.39□□□□□ -0.11
SCLT1-202ENST00000439369 JADE2Q9NQC1 790 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 SRRDQ9UH36 339 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 NRBP1Q9UHY1 535 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 RCOR1Q9UKL0 485 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 MYH7BA7E2Y1 1941 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 ZNFX1Q9P2E3 1918 aaKnown RBP14.39□□□□□ -0.11
SCLT1-202ENST00000439369 ELP1O95163 1332 aa14.39□□□□□ -0.11
SCLT1-202ENST00000439369 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 PLXNA1Q9UIW2 1896 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 FAM86B1E9PN63 330 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 PPP6R2O75170 966 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
SCLT1-202ENST00000439369 TDP2O95551 362 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 IGHA2P01877 340 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 FAM86B2P0C5J1 330 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 MYCLP12524 364 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-202ENST00000439369 ATP2B1P20020 1258 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 ICAM3P32942 547 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 MCM7P33993 719 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 UBXN2AP68543 259 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 PTPAQ15257 358 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 ZNF174Q15697 407 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 KCNV1Q6PIU1 500 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 SLFN12Q8IYM2 578 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 LINC00301Q8NCQ3 95 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 LENG9Q96B70 501 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 TINF2Q9BSI4 451 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 ARHGAP39Q9C0H5 1083 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 VTA1Q9NP79 307 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 KCNMB3Q9NPA1 279 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 CLIC4Q9Y696 253 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 CASP8AP2Q9UKL3 1982 aa14.38□□□□□ -0.11
SCLT1-202ENST00000439369 WNT7AO00755 349 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 FIBPO43427 364 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 TGFB3P10600 412 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 ITGB5P18084 799 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 NCLP19338 710 aaKnown RBP14.37□□□□□ -0.11
SCLT1-202ENST00000439369 FLT3LGP49771 235 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 PTGDRQ13258 359 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 MTMR1Q13613 665 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 STK38Q15208 465 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 CALCRLQ16602 461 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 PRR16Q569H4 304 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 ARMCX2Q7L311 632 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 PLA2G4DQ86XP0 818 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 C4orf32Q8N8J7 132 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 TMEM87AQ8NBN3 555 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 NPLOC4Q8TAT6 608 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 LEO1Q8WVC0 666 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-202ENST00000439369 FERMT2Q96AC1 680 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 SPATA32Q96LK8 384 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 MTMR9Q96QG7 549 aa14.37□□□□□ -0.11
SCLT1-202ENST00000439369 TFIP11Q9UBB9 837 aaKnown RBP14.37□□□□□ -0.11
SCLT1-202ENST00000439369 SPATA31C2B4DYI2 1134 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 SPTLC2O15270 562 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 SLC37A4O43826 429 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 OR52Z1P0C646 297 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 PRKCZQ05513 592 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 NBR1Q14596 966 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 FOXD4L6Q3SYB3 417 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-202ENST00000439369 FOXD4L3Q6VB84 417 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-202ENST00000439369 GIMAP8Q8ND71 665 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-202ENST00000439369 ETNPPLQ8TBG4 499 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms