RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 BAATQ14032 418 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-204ENST00000427724 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
TCOF1-204ENST00000427724 STAG1Q8WVM7 1258 aa11.76□□□□□ -0.53
TCOF1-204ENST00000427724 GOLGA1Q92805 767 aa11.76□□□□□ -0.53
TCOF1-204ENST00000427724 PHLPP1O60346 1717 aa11.76□□□□□ -0.53
TCOF1-204ENST00000427724 UBR1Q8IWV7 1749 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 CD19P15391 556 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 WDR44Q5JSH3 913 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 TRPM4Q8TD43 1214 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 LPAR1Q92633 364 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 CCDC97Q96F63 343 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 JPH2Q9BR39 696 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 DESI2Q9BSY9 194 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 ANKFY1Q9P2R3 1169 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 UPP2O95045 317 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 LIG4P49917 911 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 STOX1Q6ZVD7 989 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 IGSF22Q8N9C0 903 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 TBCKQ8TEA7 893 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 CTNNBL1Q8WYA6 563 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 LARSQ9P2J5 1176 aaKnown RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 A0A1W2PQ27 194 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 A0A1W2PQ64 194 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 A0A1W2PQD8 194 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 USP27XA6NNY8 438 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 WDR46O15213 610 aaKnown RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 ARHGAP6O43182 974 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 CALRP27797 417 aaKnown RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 COPB2P35606 906 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 KCNJ6P48051 423 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 ETF1P62495 437 aaKnown RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 POSTNQ15063 836 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-204ENST00000427724 VCPKMTQ9H867 229 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 FBXO28Q9NVF7 368 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 PCDHA5Q9Y5H7 936 aa11.75□□□□□ -0.53
TCOF1-204ENST00000427724 SEC31AO94979 1220 aaKnown RBP11.74□□□□□ -0.53
TCOF1-204ENST00000427724 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 QRICH1Q2TAL8 776 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 RNF187Q5TA31 235 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-204ENST00000427724 TTBK2Q6IQ55 1244 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CATSPER4Q7RTX7 472 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 RNF34Q969K3 372 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CAPNS2Q96L46 248 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CTAGE1Q96RT6 745 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 VPS16Q9H269 839 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 GPR75-ASB3A0A0A6YYF3 556 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 PDHXO00330 501 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 AKR1B10O60218 316 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CDC25BP30305 580 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 SLFN12Q8IYM2 578 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 OR6J1Q8NGC5 347 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 TBC1D5Q92609 795 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 RABEP2Q9H5N1 569 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 KIF28PB7ZC32 967 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 FDX1P10109 184 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 TFDP1Q14186 410 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 KMT5BQ4FZB7 885 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 PPP1R13BQ96KQ4 1090 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 ZDHHC15Q96MV8 337 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 KCNG1Q9UIX4 513 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 GUCA1BQ9UMX6 200 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CEP83Q9Y592 693 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CTAGE9A4FU28 777 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 ZBTB5O15062 677 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 PRPF6O94906 941 aaKnown RBP11.74□□□□□ -0.53
TCOF1-204ENST00000427724 CTSHP09668 335 aa11.74□□□□□ -0.53
TCOF1-204ENST00000427724 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
TCOF1-204ENST00000427724 TMED8Q6PL24 325 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-204ENST00000427724 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
TCOF1-204ENST00000427724 WTIPA6NIX2 430 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-204ENST00000427724 AP5Z1O43299 807 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 TOMM70O94826 608 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 CYP2C8P10632 490 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 CAP2P40123 477 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 DACT2Q5SW24 774 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 GPBP1Q86WP2 473 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 JADE2Q9NQC1 790 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 POLR3EQ9NVU0 708 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 RGS2P41220 211 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 OSTNP61366 133 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 KIF23Q02241 960 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-204ENST00000427724 SPAG1Q07617 926 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 MTMR1Q13613 665 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 SLC39A14Q15043 492 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 MLKLQ8NB16 471 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 PLCD4Q9BRC7 762 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 FAM107BQ9H098 131 aa11.73□□□□□ -0.53
TCOF1-204ENST00000427724 NT5C3AQ9H0P0 336 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms