RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 SRRM3A6NNA2 597 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 MINDY4BA8MYZ0 360 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 SOCS7O14512 581 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 MGRN1O60291 552 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 PALMO75781 387 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 SLC8A1P32418 973 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 PAK2Q13177 524 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 WTAPQ15007 396 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 SLC4A8Q2Y0W8 1093 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 SPAG5Q96R06 1193 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 COL5A2P05997 1499 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 TTC36A6NLP5 189 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 F8W031 263 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 MAP3K13O43283 966 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 CTNND1O60716 968 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 FCER1AP12319 257 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 ZNF844Q08AG5 666 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 CFAP221Q4G0U5 840 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 CCDC178Q5BJE1 867 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 PDXDC2PQ6P474 469 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 FANCBQ8NB91 859 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 SLC17A8Q8NDX2 589 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 CCT6BQ92526 530 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 TMBIM4Q9HC24 238 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 EPB41L4AQ9HCS5 686 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 TRIM33Q9UPN9 1127 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 AGAP1Q9UPQ3 857 aa12.44□□□□□ -0.42
SEC61A1-202ENST00000424880 LRRC53A6NM62 1247 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 MPHOSPH10O00566 681 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 DEXIO95424 95 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 STAT6P42226 847 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 ERVK-9P63128 1117 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 MEA1Q16626 185 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 CCDC57Q2TAC2 916 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 ADAT2Q7Z6V5 191 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 CCDC63Q8NA47 563 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 ALS2CR12Q96Q35 445 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 PURBQ96QR8 312 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 ELAC2Q9BQ52 826 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 SELENOSQ9BQE4 189 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 ACTR5Q9H9F9 607 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 SLC12A6Q9UHW9 1150 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 MYH6P13533 1939 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 SHBGP04278 402 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 PSMD2Q13200 908 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 KRT71Q3SY84 523 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 ANKRD40Q6AI12 368 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 RUBCNQ92622 972 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 CNOT6LQ96LI5 555 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 DPH5Q9H2P9 285 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 HOMER3Q9NSC5 361 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.43□□□□□ -0.427e-23■■□□□ 13.7
SEC61A1-202ENST00000424880 FBXL5Q9UKA1 691 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 PNMA2Q9UL42 364 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 HMGB1P1B2RPK0 211 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 H7C1D1 291 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 TCP1P17987 556 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 XRCC4Q13426 336 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 MFSD6Q6ZSS7 791 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 LRP10Q7Z4F1 713 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 ERICH1Q86X53 443 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 TMEM87BQ96K49 555 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 PACSIN1Q9BY11 444 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 TTYH3Q9C0H2 523 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 DDX47Q9H0S4 455 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 MLXIPLQ9NP71 852 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 GDF3Q9NR23 364 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 C15orf41Q9Y2V0 281 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 C4BP0C0L5 1744 aa12.43□□□□□ -0.42
SEC61A1-202ENST00000424880 ABCA3Q99758 1704 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 A0A1B0GVG6 124 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 TRIM37O94972 964 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 MBD4O95243 580 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 ZBED6P86452 979 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 TRAF1Q13077 416 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 TTC5Q8N0Z6 440 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 WASF1Q92558 559 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 CCDC113Q9H0I3 377 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 PIDD1Q9HB75 910 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 ABCF3Q9NUQ8 709 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 STK36Q9NRP7 1315 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 SRGNP10124 158 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 DNM2P50570 870 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 HOOK2Q96ED9 719 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 CELF4Q9BZC1 486 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 IQSEC3Q9UPP2 1182 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 C5P01031 1676 aa12.42□□□□□ -0.42
SEC61A1-202ENST00000424880 PDHA1P08559 390 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 ITGA6P23229 1130 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 COPB2P35606 906 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 ADD2P35612 726 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 KRT2P35908 639 aa12.41□□□□□ -0.42
SEC61A1-202ENST00000424880 RNASELQ05823 741 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms