RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 KBTBD4Q9NVX7 518 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 GMNCA6NCL1 334 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 DDR1Q08345 913 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
PKP4-204ENST00000421462 PFKFB3Q16875 520 aaPredicted RBP18.34■□□□□ 0.53
PKP4-204ENST00000421462 ARL6IP4Q66PJ3 421 aaKnown RBP18.34■□□□□ 0.53
PKP4-204ENST00000421462 MDM1Q8TC05 714 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 ADAMTS1Q9UHI8 967 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 CEP104O60308 925 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 CCNT1O60563 726 aaKnown RBP18.34■□□□□ 0.53
PKP4-204ENST00000421462 GOLGA8HP0CJ92 632 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 KIAA0753Q2KHM9 967 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 KIAA0895Q8NCT3 520 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 GLIS3Q8NEA6 775 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 TBC1D7Q9P0N9 293 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 MCM8Q9UJA3 840 aa18.34■□□□□ 0.53
PKP4-204ENST00000421462 TPX2Q9ULW0 747 aaKnown RBP18.34■□□□□ 0.53
PKP4-204ENST00000421462 PNPLA7Q6ZV29 1317 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 RASSF9O75901 435 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 STARD3NLO95772 234 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 CALM1P0DP23 149 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 CALM2P0DP24 149 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 CALM3P0DP25 149 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 PRLRP16471 622 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 GBP2P32456 591 aaPredicted RBP18.33■□□□□ 0.53
PKP4-204ENST00000421462 HSD17B3P37058 310 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 TRAPPC10P48553 1259 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 POLR2FP61218 127 aaKnown RBP18.33■□□□□ 0.53
PKP4-204ENST00000421462 RAPGEF1Q13905 1077 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 FUKQ8N0W3 1084 aa18.33■□□□□ 0.53
PKP4-204ENST00000421462 TMCO5BA8MYB1 307 aa18.33■□□□□ 0.52
PKP4-204ENST00000421462 HMGB1P1B2RPK0 211 aaPredicted RBP18.33■□□□□ 0.52
PKP4-204ENST00000421462 DDX47Q9H0S4 455 aaKnown RBP18.33■□□□□ 0.52
PKP4-204ENST00000421462 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.52
PKP4-204ENST00000421462 BAZ2AQ9UIF9 1905 aaKnown RBP18.33■□□□□ 0.52
PKP4-204ENST00000421462 LRP6O75581 1613 aa18.33■□□□□ 0.52
PKP4-204ENST00000421462 MROH5Q6ZUA9 1318 aa18.33■□□□□ 0.52
PKP4-204ENST00000421462 ADAMTS7Q9UKP4 1686 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 FLT3P36888 993 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 PREPLQ4J6C6 727 aaPredicted RBP18.32■□□□□ 0.52
PKP4-204ENST00000421462 TAF4BQ92750 862 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 SEC16BQ96JE7 1060 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 VAT1LQ9HCJ6 419 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 SIK3Q9Y2K2 1263 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 ERVV-2B6SEH9 535 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 EZRP15311 586 aaKnown RBP18.32■□□□□ 0.52
PKP4-204ENST00000421462 TXKP42681 527 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 RCAN1P53805 252 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 ERVK-9P63128 1117 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 ITIH3Q06033 890 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 PNMA8AQ86V59 439 aaPredicted RBP18.32■□□□□ 0.52
PKP4-204ENST00000421462 DPH5Q9H2P9 285 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 CNOT8Q9UFF9 292 aaKnown RBP18.32■□□□□ 0.52
PKP4-204ENST00000421462 LEMD3Q9Y2U8 911 aa18.32■□□□□ 0.52
PKP4-204ENST00000421462 MAGOHP61326 146 aaKnown RBP18.31■□□□□ 0.52
PKP4-204ENST00000421462 PPP1R7Q15435 360 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 HIBCHQ6NVY1 386 aaPredicted RBP18.31■□□□□ 0.52
PKP4-204ENST00000421462 FAM228AQ86W67 206 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 CACNA2D3Q8IZS8 1091 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 MAGOHBQ96A72 148 aaKnown RBP18.31■□□□□ 0.52
PKP4-204ENST00000421462 CALML3P27482 149 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 CDC25CP30307 473 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 ADAT2Q7Z6V5 191 aaKnown RBP18.31■□□□□ 0.52
PKP4-204ENST00000421462 TCP11Q8WWU5 503 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 MIEF2Q96C03 454 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 TMBIM4Q9HC24 238 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 LRRC4CQ9HCJ2 640 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 PCDHA4Q9UN74 947 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 TLDC2A0PJX2 215 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 KRT71Q3SY84 523 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 FBXL5Q9UKA1 691 aa18.31■□□□□ 0.52
PKP4-204ENST00000421462 SLC9C1Q4G0N8 1177 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 GLE1Q53GS7 698 aaKnown RBP18.3■□□□□ 0.52
PKP4-204ENST00000421462 ARFGAP2Q8N6H7 521 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 FAM133AQ8N9E0 248 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 NEUROG2Q9H2A3 272 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 GGT7Q9UJ14 662 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 A0A1W2PQJ5 194 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 HGSO14964 777 aaPredicted RBP18.3■□□□□ 0.52
PKP4-204ENST00000421462 CLTAP09496 248 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 SCTRP47872 440 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 IFFO1Q0D2I5 559 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 CDC37Q16543 378 aaPredicted RBP18.3■□□□□ 0.52
PKP4-204ENST00000421462 MSL1Q68DK7 614 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 ZNF572Q7Z3I7 529 aaPredicted RBP18.3■□□□□ 0.52
PKP4-204ENST00000421462 RAPGEF5Q92565 580 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 GOPCQ9HD26 462 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 PCDHA6Q9UN73 950 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 PCDHA8Q9Y5H6 950 aa18.3■□□□□ 0.52
PKP4-204ENST00000421462 CLGNO14967 610 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 DDAH1O94760 285 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 TNNC1P63316 161 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 CDK17Q00537 523 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 MAN2A1Q16706 1144 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 ANKRD20A8PQ5CZ79 823 aa18.29■□□□□ 0.52
PKP4-204ENST00000421462 UHMK1Q8TAS1 419 aaKnown RBP18.29■□□□□ 0.52
PKP4-204ENST00000421462 WHAMMQ8TF30 809 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms