RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 RXRAP19793 462 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 DNAJB2P25686 324 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 ACLYP53396 1101 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 TNFAIP2Q03169 654 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 TLE2Q04725 743 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 TROAPQ12815 778 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 SART3Q15020 963 aaKnown RBP6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 KCNA10Q16322 511 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 CCSAPQ6IQ19 270 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 TAPT1Q6NXT6 567 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 PPP1R18Q6NYC8 613 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 SH3RF1Q7Z6J0 888 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 KLHDC9Q8NEP7 349 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 SYTL5Q8TDW5 730 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 MORC4Q8TE76 937 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 NUP133Q8WUM0 1156 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 TCEANC2Q96MN5 208 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 TAAR1Q96RJ0 339 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 PIGSQ96S52 555 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 UPF3AQ9H1J1 476 aaKnown RBP6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 TMEM134Q9H6X4 195 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 LY9Q9HBG7 655 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 PRDM5Q9NQX1 630 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 ADD3Q9UEY8 706 aaKnown RBP6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 SZT2Q5T011 3432 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 ABCB11O95342 1321 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 SOX1O00570 391 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 SH2B2O14492 632 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 OPLAHO14841 1288 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 ZBTB5O15062 677 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 DYNC1LI2O43237 492 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 CYTH3O43739 400 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 PQBP1O60828 265 aaKnown RBP6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 PLEKHA8P1O95397 391 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 CFBP00751 764 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 ASGR1P07306 291 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 MCM5P33992 734 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 GJA9P57773 515 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 PDE4DQ08499 809 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 SNX17Q15036 470 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 GNASQ5JWF2 1037 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 CASC1Q6TDU7 716 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 CXCL17Q6UXB2 119 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 NFXL1Q6ZNB6 911 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 CATIPQ7Z7H3 387 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 TLK2Q86UE8 772 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 ZNF654Q8IZM8 581 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 CMTR1Q8N1G2 835 aaKnown RBP6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 COPS5Q92905 334 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 VTI1AQ96AJ9 217 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 MTMR8Q96EF0 704 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 TSEN34Q9BSV6 310 aaKnown RBP6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 SPC25Q9HBM1 224 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 VTA1Q9NP79 307 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 STARD7Q9NQZ5 370 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 PDLIM7Q9NR12 457 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 PNMA2Q9UL42 364 aa6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 GNEQ9Y223 722 aaKnown RBP6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 MRPL11Q9Y3B7 192 aaKnown RBP6.7□□□□□ -1.34
HMGB1P20-201ENST00000402555 LTBP2Q14767 1821 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 hCG_1642624A0A1W2PR95 340 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 TRIM43BA6NCK2 446 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 CCDC69A6NI79 296 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 DDAH1O94760 285 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 ARIH2O95376 493 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 EIF2AK2P19525 551 aaKnown RBP6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 EDNRBP24530 442 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 ITGB8P26012 769 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 CST5P28325 142 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 HOXA13P31271 388 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 FSCN1Q16658 493 aaKnown RBP6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 ADCK5Q3MIX3 580 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 IQSEC1Q6DN90 963 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 MCF2L2Q86YR7 1114 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 PCSK9Q8NBP7 692 aaKnown RBP6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 RGS22Q8NE09 1264 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 DNERQ8NFT8 737 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 PPP1R13LQ8WUF5 828 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 TRIM43Q96BQ3 446 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 TMEM87BQ96K49 555 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 NEK1Q96PY6 1258 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 RMDN3Q96TC7 470 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 PRR14Q9BWN1 585 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 AMNQ9BXJ7 453 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 WDR11Q9BZH6 1224 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 UBE2OQ9C0C9 1292 aaKnown RBP6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 AP5M1Q9H0R1 490 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 RIOX1Q9H6W3 641 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 PRKAG2Q9UGJ0 569 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 PCDHA1Q9Y5I3 950 aa6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 LAMA2P24043 3122 aaKnown RBP6.69□□□□□ -1.34
HMGB1P20-201ENST00000402555 RBM47A0AV96 593 aaKnown RBP6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 RCCD1A6NED2 376 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 MOXD2PA6NHM9 499 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 MYL3P08590 195 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 CLTBP09497 229 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 CPA1P15085 419 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 BMP8BP34820 402 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 HSD17B4P51659 736 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 PSMC6P62333 389 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms