RNA–Protein interactions for RNA: ENST00000398888.6

USP19-202, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP19, Length 4,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-202ENST00000398888 OTUD6AQ7L8S5 288 aa14.35□□□□□ -0.11
USP19-202ENST00000398888 PROSER2Q86WR7 435 aaPredicted RBP14.35□□□□□ -0.11
USP19-202ENST00000398888 FPGT-TNNI3KV9GXZ4 949 aa14.35□□□□□ -0.11
USP19-202ENST00000398888 ATP6V1G1O75348 118 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 CDC25CP30307 473 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 MLH1P40692 756 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 SCTRP47872 440 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 EIF4A1P60842 406 aaKnown RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 CUL1Q13616 776 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 PPP4R3AQ6IN85 833 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 MFSD6Q6ZSS7 791 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 TRPM8Q7Z2W7 1104 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 MYCBPAPQ8TBZ2 947 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 LRGUKQ96M69 825 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 SH3GL2Q99962 352 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 ZNF446Q9NWS9 450 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 CTDP1Q9Y5B0 961 aaPredicted RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 AP2B1P63010 937 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 FGFR1OP2Q9NVK5 253 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 TUBA8Q9NY65 449 aaPredicted RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP19-202ENST00000398888 ATP5JP18859 108 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 TNFAIP3P21580 790 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 EEF1B2P24534 225 aaKnown RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 PMS1P54277 932 aaKnown RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 ANO5Q75V66 913 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 DIS3L2Q8IYB7 885 aaKnown RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 IP6K1Q92551 441 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 PPWD1Q96BP3 646 aaKnown RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 NRBF2Q96F24 287 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 TAF1DQ9H5J8 278 aaPredicted RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 KIAA1210Q9ULL0 1709 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 MCF2P10911 925 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 CYP27A1Q02318 531 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 ZNF174Q15697 407 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.34□□□□□ -0.116e-7■■■■□ 22.1
USP19-202ENST00000398888 HAUS8Q9BT25 410 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 C10orf88Q9H8K7 445 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 SAMSN1Q9NSI8 373 aaKnown RBP14.34□□□□□ -0.11
USP19-202ENST00000398888 ZNF148Q9UQR1 794 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP19-202ENST00000398888 C2CD2Q9Y426 696 aa14.34□□□□□ -0.11
USP19-202ENST00000398888 ARHGEF9O43307 516 aa14.33□□□□□ -0.11
USP19-202ENST00000398888 KRT8P05787 483 aa14.33□□□□□ -0.11
USP19-202ENST00000398888 KLC3Q6P597 504 aa14.33□□□□□ -0.11
USP19-202ENST00000398888 DTHD1Q6ZMT9 781 aa14.33□□□□□ -0.11
USP19-202ENST00000398888 MSANTD4Q8NCY6 345 aa14.33□□□□□ -0.11
USP19-202ENST00000398888 DACT3Q96B18 629 aaPredicted RBP14.33□□□□□ -0.11
USP19-202ENST00000398888 ZMYND12Q9H0C1 365 aa14.33□□□□□ -0.11
USP19-202ENST00000398888 MFAP3LO75121 409 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 SASH3O75995 380 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 ATP6V1G2O95670 118 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 HARSP12081 509 aaKnown RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 ZNF76P36508 570 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 C1orf146Q5VVC0 180 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 KRT40Q6A162 431 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 CCNI2Q6ZMN8 369 aaPredicted RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 TMTC2Q8N394 836 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 SUCLA2Q9P2R7 463 aaPredicted RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 MLH3Q9UHC1 1453 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 STK10O94804 968 aaKnown RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 MOCS3O95396 460 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 VIL1P09327 827 aaKnown RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 WDR60Q8WVS4 1066 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 SUCLG2Q96I99 432 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 CCDC138Q96M89 665 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 BLZF1Q9H2G9 400 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 HDAC6Q9UBN7 1215 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 LRWD1Q9UFC0 647 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 DBNLQ9UJU6 430 aaKnown RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 ZNF229Q9UJW7 825 aa14.33□□□□□ -0.12
USP19-202ENST00000398888 TRPC5Q9UL62 973 aaPredicted RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 PACSIN2Q9UNF0 486 aaPredicted RBP14.33□□□□□ -0.12
USP19-202ENST00000398888 WDR91A4D1P6 747 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 PGRMC1O00264 195 aaKnown RBP14.32□□□□□ -0.12
USP19-202ENST00000398888 VCAM1P19320 739 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 LMNB1P20700 586 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 TRPC1P48995 793 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 TBL3Q12788 808 aaKnown RBP14.32□□□□□ -0.12
USP19-202ENST00000398888 LGSNQ5TDP6 509 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 CAPN12Q6ZSI9 719 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 IL17REQ8NFR9 667 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 RNPC3Q96LT9 517 aaKnown RBP14.32□□□□□ -0.12
USP19-202ENST00000398888 TMEM60Q9H2L4 133 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 IFT122Q9HBG6 1241 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 MRGBPQ9NV56 204 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 L3MBTL1Q9Y468 752 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 QRICH2Q9H0J4 1663 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 CDHR2Q9BYE9 1310 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 ACADSP16219 412 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 KRT2P35908 639 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 ZCWPW2Q504Y3 356 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 ENOX1Q8TC92 643 aaKnown RBP14.32□□□□□ -0.12
USP19-202ENST00000398888 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 RTEL1Q9NZ71 1219 aa14.32□□□□□ -0.12
USP19-202ENST00000398888 TBK1Q9UHD2 729 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms