RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 NUP58Q9BVL2 599 aa15.23■□□□□ 0.03
COL6A2-203ENST00000397763 TLR10Q9BXR5 811 aa15.23■□□□□ 0.03
COL6A2-203ENST00000397763 ATP8A2Q9NTI2 1148 aa15.23■□□□□ 0.03
COL6A2-203ENST00000397763 ARPP21Q9UBL0 812 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-203ENST00000397763 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
COL6A2-203ENST00000397763 DISP2A7MBM2 1401 aa15.23■□□□□ 0.03
COL6A2-203ENST00000397763 NDUFAB1O14561 156 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 SLC37A4O43826 429 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 RAD21O60216 631 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 SLURP2P0DP57 97 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 EHHADHQ08426 723 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 C12orf60Q5U649 245 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
COL6A2-203ENST00000397763 PTF1AQ7RTS3 328 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 GEMIN8Q9NWZ8 242 aaKnown RBP15.22■□□□□ 0.03
COL6A2-203ENST00000397763 GRM4Q14833 912 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 NONOQ15233 471 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL6A2-203ENST00000397763 KRT12Q99456 494 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 STIM2Q9P246 746 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 ANKIB1Q9P2G1 1089 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 SIK3Q9Y2K2 1263 aa15.22■□□□□ 0.03
COL6A2-203ENST00000397763 NPHP3-ACAD11A0A0J9YXS1 232 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 SEC24CP53992 1094 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 GRB10Q13322 594 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 MSL3Q8N5Y2 521 aaKnown RBP15.21■□□□□ 0.03
COL6A2-203ENST00000397763 PURBQ96QR8 312 aaKnown RBP15.21■□□□□ 0.03
COL6A2-203ENST00000397763 ANO9A1A5B4 782 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 MYO1FO00160 1098 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 PALMO75781 387 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 HNRNPH1P31943 449 aaKnown RBP15.21■□□□□ 0.03
COL6A2-203ENST00000397763 HPDP32754 393 aaPredicted RBP15.21■□□□□ 0.03
COL6A2-203ENST00000397763 PAFAH1B1P43034 410 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 POLR2FP61218 127 aaKnown RBP15.21■□□□□ 0.03
COL6A2-203ENST00000397763 SV2BQ7L1I2 683 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 CALML4Q96GE6 196 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 YY1AP1Q9H869 796 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 BLOC1S4Q9NUP1 217 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.03
COL6A2-203ENST00000397763 USP17L5A8MUK1 530 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 TULP1O00294 542 aaPredicted RBP15.21■□□□□ 0.02
COL6A2-203ENST00000397763 TRAF5O00463 557 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 NNTQ13423 1086 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 DDB1Q16531 1140 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 UBE2SQ16763 222 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 RNF187Q5TA31 235 aaPredicted RBP15.21■□□□□ 0.02
COL6A2-203ENST00000397763 NEK8Q86SG6 692 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 OR2W6PQ8NHA6 318 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 ALS2CR12Q96Q35 445 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 ERGIC2Q96RQ1 377 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 GRIN2DO15399 1336 aa15.21■□□□□ 0.02
COL6A2-203ENST00000397763 HSF2BPO75031 334 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 HEXIM1O94992 359 aaKnown RBP15.2■□□□□ 0.02
COL6A2-203ENST00000397763 TNNI2P48788 182 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL6A2-203ENST00000397763 FAM114A1Q8IWE2 563 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 RPGRIP1Q96KN7 1286 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 ADAMTS1Q9UHI8 967 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 PPFIA1Q13136 1202 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 ECM1Q16610 540 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 CCDC40Q4G0X9 1142 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 IQCEQ6IPM2 695 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 CNNM4Q6P4Q7 775 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 MARCH10Q8NA82 808 aaPredicted RBP15.2■□□□□ 0.02
COL6A2-203ENST00000397763 TBC1D5Q92609 795 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 PNMA5Q96PV4 448 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 JPH2Q9BR39 696 aaPredicted RBP15.2■□□□□ 0.02
COL6A2-203ENST00000397763 GPCPD1Q9NPB8 672 aa15.2■□□□□ 0.02
COL6A2-203ENST00000397763 KIAA0754O94854 1291 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 KLRC1P26715 233 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 DGKHQ86XP1 1220 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 AMOTL1Q8IY63 956 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 LRRC47Q8N1G4 583 aaKnown RBP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 MMGT1Q8N4V1 131 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 SNX29Q8TEQ0 813 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 DDX12PQ92771 950 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 MARCH6O60337 910 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 KCNMA1Q12791 1236 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 PLCH1Q4KWH8 1693 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 CCDC91Q7Z6B0 441 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 RETREG2Q8NC44 543 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 C7orf25Q9BPX7 421 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 LRP5O75197 1615 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 EIF3HO15372 352 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 TLR2O60603 784 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 LDHBP07195 334 aaKnown RBP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 RASA1P20936 1047 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 MAP2K2P36507 400 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 CALCRLQ16602 461 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 MAATS1Q7Z4T9 603 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 ZSCAN29Q8IWY8 852 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 FAM133AQ8N9E0 248 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 NOC3LQ8WTT2 800 aaKnown RBP15.19■□□□□ 0.02
COL6A2-203ENST00000397763 BAP1Q92560 729 aa15.19■□□□□ 0.02
COL6A2-203ENST00000397763 LARP4BQ92615 738 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms