RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 SHC4Q6S5L8 630 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 GADL1Q6ZQY3 521 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 NBPF15Q8N660 670 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 UBE2TQ9NPD8 197 aaPredicted RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 ATP8A2Q9NTI2 1148 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 SLC4A1P02730 911 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 YARSP54577 528 aaKnown RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 ITIH3Q06033 890 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 PDCLQ13371 301 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 RUFY4Q6ZNE9 571 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 VPS52Q8N1B4 723 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 ENAHQ8N8S7 591 aaPredicted RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 NAP1L3Q99457 506 aaPredicted RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 RNF26Q9BY78 433 aaPredicted RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 BHMT2Q9H2M3 363 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 NXF1Q9UBU9 619 aaKnown RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 PDE4DIPQ5VU43 2346 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 ZNF335Q9H4Z2 1342 aaPredicted RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 NPHP3-ACAD11A0A0J9YXS1 232 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 PSDA5PKW4 1024 aaPredicted RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 E9PMD0 336 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 ACSL3O95573 720 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 POLR2MP0CAP2 368 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 IFNAR1P17181 557 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 EIF2AK2P19525 551 aaKnown RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 CASP8Q14790 479 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 PALM2Q8IXS6 379 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 MXD3Q9BW11 206 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 AZI2Q9H6S1 392 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 RRP15Q9Y3B9 282 aaKnown RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 SERPINB2P05120 415 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 LONP1P36776 959 aaKnown RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 TAF12Q16514 161 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 TCP11X2Q5H9J9 407 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 ZNF658Q5TYW1 1059 aaPredicted RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 NFRKBQ6P4R8 1299 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 FMR1NBQ8N0W7 255 aaPredicted RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 ANKRD35Q8N283 1001 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 RSAD2Q8WXG1 361 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 PPM1EQ8WY54 764 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 RSRC1Q96IZ7 334 aaKnown RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 GSDMAQ96QA5 445 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 ZNF577Q9BSK1 485 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 NT5C3AQ9H0P0 336 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 GGT7Q9UJ14 662 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 FIS1Q9Y3D6 152 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 SRPRBQ9Y5M8 271 aaKnown RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 HEG1Q9ULI3 1381 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 PTCH1Q13635 1447 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 ARHGAP42A6NI28 874 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 ZBED4O75132 1171 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 CDK8P49336 464 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 KIF11P52732 1056 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 RCN2Q14257 317 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 POTEDQ86YR6 584 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 RETREG2Q8NC44 543 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 RIN2Q8WYP3 895 aaPredicted RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 RABGGTAQ92696 567 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 HEMGNQ9BXL5 484 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 PFDN4Q9NQP4 134 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 CHORDC1Q9UHD1 332 aaPredicted RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 RPAP1Q9BWH6 1393 aaPredicted RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 GAS8O95995 478 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 NXNQ6DKJ4 435 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 CHP1Q99653 195 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 DNAI2Q9GZS0 605 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 NOD1Q9Y239 953 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 PCDHA13Q9Y5I0 950 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 GOLGA8MH3BSY2 632 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 ALDH3A1P30838 453 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 TPD52P55327 224 aaPredicted RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 DHX9Q08211 1270 aaKnown RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 NIM1KQ8IY84 436 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 CACNA2D3Q8IZS8 1091 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 HOOK2Q96ED9 719 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 MPHOSPH6Q99547 160 aaKnown RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 LY9Q9HBG7 655 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 NOVA2Q9UNW9 492 aaKnown RBP5.45□□□□□ -1.54
LTN1-202ENST00000389194 AATKQ6ZMQ8 1374 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 H7C1W4 665 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 DDAH1O94760 285 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 MYL7Q01449 175 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 FMR1Q06787 632 aaKnown RBP eCLIP5.45□□□□□ -1.54
LTN1-202ENST00000389194 TRAF1Q13077 416 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 C7orf31Q8N865 590 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 RAB3IL1Q8TBN0 382 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 MS4A14Q96JA4 679 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 ATG3Q9NT62 314 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 ARAP3Q8WWN8 1544 aa5.45□□□□□ -1.54
LTN1-202ENST00000389194 SGK1O00141 431 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 CIAO1O76071 339 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 PIK3CAP42336 1068 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 POLGP54098 1239 aaPredicted RBP5.44□□□□□ -1.54
LTN1-202ENST00000389194 GABPAQ06546 454 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 TXNRD1Q16881 649 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 FAM186BQ8IYM0 893 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 BANK1Q8NDB2 785 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 GOLPH3Q9H4A6 298 aa5.44□□□□□ -1.54
LTN1-202ENST00000389194 FAM114A2Q9NRY5 505 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms