RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 FOXR1Q6PIV2 292 aa18.86■□□□□ 0.61
PHF1-202ENST00000374516 CYP26C1Q6V0L0 522 aa18.86■□□□□ 0.61
PHF1-202ENST00000374516 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
PHF1-202ENST00000374516 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
PHF1-202ENST00000374516 ZNF713Q8N859 430 aaPredicted RBP18.86■□□□□ 0.61
PHF1-202ENST00000374516 NYAP2Q9P242 653 aa18.86■□□□□ 0.61
PHF1-202ENST00000374516 MYH4Q9Y623 1939 aa18.86■□□□□ 0.61
PHF1-202ENST00000374516 LAD1O00515 517 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 VIL1P09327 827 aaKnown RBP18.85■□□□□ 0.61
PHF1-202ENST00000374516 CCT6AP40227 531 aaKnown RBP18.85■□□□□ 0.61
PHF1-202ENST00000374516 TNNI2P48788 182 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 SNAP25P60880 206 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 AMPD2Q01433 879 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 NAALADL2Q58DX5 795 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 OGFOD1Q8N543 542 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 ZFP91Q96JP5 570 aaPredicted RBP18.85■□□□□ 0.61
PHF1-202ENST00000374516 EFCC1Q9HA90 598 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 MED4Q9NPJ6 270 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 F5H6K3 240 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 N4BP3O15049 544 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 KLRC3Q07444 240 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 KRT31Q15323 416 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 DLGAP5Q15398 846 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 RRAGBQ5VZM2 374 aa18.85■□□□□ 0.61
PHF1-202ENST00000374516 LIMA1Q9UHB6 759 aaKnown RBP18.85■□□□□ 0.61
PHF1-202ENST00000374516 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
PHF1-202ENST00000374516 EDIL3O43854 480 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 TDP2O95551 362 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 PRPHP41219 470 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 TXKP42681 527 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 GMLQ99445 158 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 PYM1Q9BRP8 204 aaKnown RBP18.84■□□□□ 0.61
PHF1-202ENST00000374516 ACBD3Q9H3P7 528 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
PHF1-202ENST00000374516 GREB1LQ9C091 1923 aaPredicted RBP18.84■□□□□ 0.61
PHF1-202ENST00000374516 QRICH1Q2TAL8 776 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 RBM26Q5T8P6 1007 aaKnown RBP18.84■□□□□ 0.61
PHF1-202ENST00000374516 NCAPH2Q6IBW4 605 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 LRRC15Q8TF66 581 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 SLF1Q9BQI6 1058 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.84■□□□□ 0.61
PHF1-202ENST00000374516 VEZTQ9HBM0 779 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 RIC8AQ9NPQ8 531 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 TMOD2Q9NZR1 351 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 ATRNL1Q5VV63 1379 aa18.84■□□□□ 0.61
PHF1-202ENST00000374516 GTPBP6O43824 516 aaPredicted RBP18.83■□□□□ 0.61
PHF1-202ENST00000374516 SLC37A4O43826 429 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 GRIPAP1Q4V328 841 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 LRRC31Q6UY01 552 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 CDAN1Q8IWY9 1227 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 SPICE1Q8N0Z3 855 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 SLC16A10Q8TF71 515 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 VPS16Q9H269 839 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 PSTPIP2Q9H939 334 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 ZNF70Q9UC06 446 aaPredicted RBP18.83■□□□□ 0.61
PHF1-202ENST00000374516 CTNND2Q9UQB3 1225 aa18.83■□□□□ 0.61
PHF1-202ENST00000374516 MTMR8Q96EF0 704 aa18.83■□□□□ 0.6
PHF1-202ENST00000374516 HDAC9Q9UKV0 1011 aa18.83■□□□□ 0.6
PHF1-202ENST00000374516 SCAF8Q9UPN6 1271 aaKnown RBP18.83■□□□□ 0.6
PHF1-202ENST00000374516 MAPK8IP1Q9UQF2 711 aa18.83■□□□□ 0.6
PHF1-202ENST00000374516 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.6
PHF1-202ENST00000374516 A0A1W2PRG0 241 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 KRT9P35527 623 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 NOP2P46087 812 aaKnown RBP18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 IKQ13123 557 aaPredicted RBP18.82■□□□□ 0.6
PHF1-202ENST00000374516 USP17L6PQ6QN14 398 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 CABP7Q86V35 215 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 DCAF4Q8WV16 495 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 CUL5Q93034 780 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 CCSER1Q9C0I3 900 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 FAM204AQ9H8W3 233 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 VIPAS39Q9H9C1 493 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 ZNRF3Q9ULT6 936 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 NDUFB10O96000 172 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 RPN1P04843 607 aaKnown RBP18.82■□□□□ 0.6
PHF1-202ENST00000374516 CALCRLQ16602 461 aa18.82■□□□□ 0.6
PHF1-202ENST00000374516 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
PHF1-202ENST00000374516 PLCG1P19174 1290 aa18.81■□□□□ 0.6
PHF1-202ENST00000374516 MRPL12P52815 198 aaKnown RBP18.81■□□□□ 0.6
PHF1-202ENST00000374516 COPB1P53618 953 aaKnown RBP18.81■□□□□ 0.6
PHF1-202ENST00000374516 TRIM14Q14142 442 aa18.81■□□□□ 0.6
PHF1-202ENST00000374516 CDC37Q16543 378 aaPredicted RBP18.81■□□□□ 0.6
PHF1-202ENST00000374516 NIM1KQ8IY84 436 aa18.81■□□□□ 0.6
PHF1-202ENST00000374516 UIMC1Q96RL1 719 aa18.81■□□□□ 0.6
PHF1-202ENST00000374516 CHP1Q99653 195 aa18.81■□□□□ 0.6
PHF1-202ENST00000374516 PIM2Q9P1W9 311 aa18.81■□□□□ 0.6
PHF1-202ENST00000374516 EPN1Q9Y6I3 576 aaPredicted RBP18.81■□□□□ 0.6
PHF1-202ENST00000374516 ECE1P42892 770 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 MAGEA9P43362 315 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 PPP1R18Q6NYC8 613 aa18.8■□□□□ 0.6
PHF1-202ENST00000374516 MIGA2Q7L4E1 593 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms