RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 SLC37A4O43826 429 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 ERLIN1O75477 346 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 TDP2O95551 362 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 FOSP01100 380 aaPredicted RBP20.12■□□□□ 0.81
CD40-201ENST00000372276 MCM6Q14566 821 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 CERKLQ49MI3 558 aaPredicted RBP20.12■□□□□ 0.81
CD40-201ENST00000372276 TEX35Q5T0J7 233 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 TMEM179Q6ZVK1 233 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 SLC35F6Q8N357 371 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 KIAA0895Q8NCT3 520 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 HNRNPLLQ8WVV9 542 aaKnown RBP20.12■□□□□ 0.81
CD40-201ENST00000372276 SLF1Q9BQI6 1058 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 GBP3Q9H0R5 595 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 NUCKS1Q9H1E3 243 aaKnown RBP20.12■□□□□ 0.81
CD40-201ENST00000372276 ZNF446Q9NWS9 450 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 SLC1A4P43007 532 aa20.11■□□□□ 0.81
CD40-201ENST00000372276 EHHADHQ08426 723 aa20.11■□□□□ 0.81
CD40-201ENST00000372276 DOK7Q18PE1 504 aa20.11■□□□□ 0.81
CD40-201ENST00000372276 VWA3BQ502W6 1294 aa20.11■□□□□ 0.81
CD40-201ENST00000372276 PCMTD1Q96MG8 357 aaPredicted RBP20.11■□□□□ 0.81
CD40-201ENST00000372276 MBOAT7Q96N66 472 aa20.11■□□□□ 0.81
CD40-201ENST00000372276 COL2A1P02458 1487 aaPredicted RBP20.1■□□□□ 0.81
CD40-201ENST00000372276 CTAGE15A4D2H0 777 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 RNF225M0QZC1 329 aaPredicted RBP20.1■□□□□ 0.81
CD40-201ENST00000372276 CTAGE8P0CG41 777 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 PNMA6AP0CW24 399 aaPredicted RBP20.1■□□□□ 0.81
CD40-201ENST00000372276 FCER1AP12319 257 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 SCNN1DP51172 638 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 EIF6P56537 245 aaKnown RBP20.1■□□□□ 0.81
CD40-201ENST00000372276 CC2D2BQ6DHV5 1058 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 TATDN1Q6P1N9 297 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 CTAGE6Q86UF2 777 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 CTAGE4Q8IX94 777 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 CCDC65Q8IXS2 484 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 GMCL1P1Q8NEA9 526 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 CEP63Q96MT8 703 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 SEMA6BQ9H3T3 888 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 FHOD1Q9Y613 1164 aa20.1■□□□□ 0.81
CD40-201ENST00000372276 USP17L10C9JJH3 530 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 ENTPD3O75355 529 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 MCM3P25205 808 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 SLC15A2Q16348 729 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 GRIPAP1Q4V328 841 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 MIIPQ5JXC2 388 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 HAUS3Q68CZ6 603 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 SLFN13Q68D06 897 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 KIAA1328Q86T90 577 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 COL23A1Q86Y22 540 aaPredicted RBP20.09■□□□□ 0.81
CD40-201ENST00000372276 MYOCDQ8IZQ8 938 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 MSL3Q8N5Y2 521 aaKnown RBP20.09■□□□□ 0.81
CD40-201ENST00000372276 ERMNQ8TAM6 284 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 DDX12PQ92771 950 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 GMCL1Q96IK5 515 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 CHP1Q99653 195 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 SLC39A2Q9NP94 309 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 STK32BQ9NY57 414 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 ANO9A1A5B4 782 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 EDIL3O43854 480 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 PPP1R11O60927 126 aaPredicted RBP20.09■□□□□ 0.81
CD40-201ENST00000372276 FKBP3Q00688 224 aaKnown RBP20.09■□□□□ 0.81
CD40-201ENST00000372276 ATP2B2Q01814 1243 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 SPA17Q15506 151 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 CC2D1AQ6P1N0 951 aaPredicted RBP20.09■□□□□ 0.81
CD40-201ENST00000372276 WDR59Q6PJI9 974 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 MSANTD4Q8NCY6 345 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 SUPT20HQ8NEM7 779 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 HAS1Q92839 578 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 AMNQ9BXJ7 453 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 PARD6BQ9BYG5 372 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 IRX2Q9BZI1 471 aaPredicted RBP20.09■□□□□ 0.81
CD40-201ENST00000372276 NDST4Q9H3R1 872 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 MYO6Q9UM54 1294 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 PCDHA1Q9Y5I3 950 aa20.09■□□□□ 0.81
CD40-201ENST00000372276 H0YIN7 160 aa20.08■□□□□ 0.8
CD40-201ENST00000372276 USO1O60763 962 aaKnown RBP20.08■□□□□ 0.8
CD40-201ENST00000372276 CKAP4Q07065 602 aaKnown RBP20.08■□□□□ 0.8
CD40-201ENST00000372276 R3HDM1Q15032 1099 aaKnown RBP20.08■□□□□ 0.8
CD40-201ENST00000372276 TTBK2Q6IQ55 1244 aa20.08■□□□□ 0.8
CD40-201ENST00000372276 PPP4R3CPQ6ZMV5 832 aa20.08■□□□□ 0.8
CD40-201ENST00000372276 RAB21Q9UL25 225 aa20.08■□□□□ 0.8
CD40-201ENST00000372276 PLAGL2Q9UPG8 496 aa20.08■□□□□ 0.8
CD40-201ENST00000372276 PITPNM2Q9BZ72 1349 aa20.08■□□□□ 0.8
CD40-201ENST00000372276 MMP10P09238 476 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
CD40-201ENST00000372276 IDEP14735 1019 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 UBE2SQ16763 222 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 QRICH1Q2TAL8 776 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 CCDC122Q5T0U0 273 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 CNKSR1Q969H4 720 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 CCDC42Q96M95 316 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 ZMYND15Q9H091 742 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 NHEJ1Q9H9Q4 299 aaPredicted RBP20.07■□□□□ 0.8
CD40-201ENST00000372276 KCNMB3Q9NPA1 279 aa20.07■□□□□ 0.8
CD40-201ENST00000372276 MYH7BA7E2Y1 1941 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 POTEMA6NI47 508 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 KIF5AQ12840 1032 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 GPS2Q13227 327 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 CDC37Q16543 378 aaPredicted RBP20.06■□□□□ 0.8
CD40-201ENST00000372276 Q4G0T1 1027 aa20.06■□□□□ 0.8
CD40-201ENST00000372276 DACT2Q5SW24 774 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms