RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 LIMA1Q9UHB6 759 aaKnown RBP20.11■□□□□ 0.81
HDAC10-202ENST00000349505 ZNF215Q9UL58 517 aaPredicted RBP20.11■□□□□ 0.81
HDAC10-202ENST00000349505 KDM3AQ9Y4C1 1321 aa20.11■□□□□ 0.81
HDAC10-202ENST00000349505 OPLAHO14841 1288 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 TBX3O15119 743 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 HOXA7P31268 230 aaPredicted RBP20.1■□□□□ 0.81
HDAC10-202ENST00000349505 Q4G0T1 1027 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 CNNM4Q6P4Q7 775 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 ANKRD20A12PQ8NF67 263 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 DHTKD1Q96HY7 919 aaPredicted RBP20.1■□□□□ 0.81
HDAC10-202ENST00000349505 RANBP17Q9H2T7 1088 aaKnown RBP20.1■□□□□ 0.81
HDAC10-202ENST00000349505 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 PVALEFA0A1B0GWK0 134 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 SHTN1A0MZ66 631 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 PDE4DQ08499 809 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 RAD54LQ92698 747 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 P2RX7Q99572 595 aaKnown RBP20.1■□□□□ 0.81
HDAC10-202ENST00000349505 NT5C3AQ9H0P0 336 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 GINM1Q9NU53 330 aa20.1■□□□□ 0.81
HDAC10-202ENST00000349505 CIITAP33076 1130 aa20.09■□□□□ 0.81
HDAC10-202ENST00000349505 ETF1P62495 437 aaKnown RBP20.09■□□□□ 0.81
HDAC10-202ENST00000349505 FEM1BQ9UK73 627 aa20.09■□□□□ 0.81
HDAC10-202ENST00000349505 MAPK8IP1Q9UQF2 711 aa20.09■□□□□ 0.81
HDAC10-202ENST00000349505 PHF20L1A8MW92 1017 aa20.08■□□□□ 0.81
HDAC10-202ENST00000349505 FZD9O00144 591 aa20.08■□□□□ 0.81
HDAC10-202ENST00000349505 ARHGAP6O43182 974 aa20.08■□□□□ 0.81
HDAC10-202ENST00000349505 PBX1P40424 430 aa20.08■□□□□ 0.81
HDAC10-202ENST00000349505 TEPSINQ96N21 525 aa20.08■□□□□ 0.81
HDAC10-202ENST00000349505 NUDT12Q9BQG2 462 aa20.08■□□□□ 0.81
HDAC10-202ENST00000349505 ATAD5Q96QE3 1844 aa20.08■□□□□ 0.81
HDAC10-202ENST00000349505 CYP3A4P08684 503 aa20.08■□□□□ 0.8
HDAC10-202ENST00000349505 MCM6Q14566 821 aa20.08■□□□□ 0.8
HDAC10-202ENST00000349505 R3HDM1Q15032 1099 aaKnown RBP20.08■□□□□ 0.8
HDAC10-202ENST00000349505 KRT31Q15323 416 aa20.08■□□□□ 0.8
HDAC10-202ENST00000349505 TCP11X2Q5H9J9 407 aa20.08■□□□□ 0.8
HDAC10-202ENST00000349505 UNC13DQ70J99 1090 aa20.08■□□□□ 0.8
HDAC10-202ENST00000349505 KRT222Q8N1A0 295 aa20.08■□□□□ 0.8
HDAC10-202ENST00000349505 ETNPPLQ8TBG4 499 aa20.08■□□□□ 0.8
HDAC10-202ENST00000349505 BICDL2A1A5D9 508 aa20.07■□□□□ 0.8
HDAC10-202ENST00000349505 MYMKA6NI61 221 aa20.07■□□□□ 0.8
HDAC10-202ENST00000349505 TEX33O43247 280 aa20.07■□□□□ 0.8
HDAC10-202ENST00000349505 NOC3LQ8WTT2 800 aaKnown RBP20.07■□□□□ 0.8
HDAC10-202ENST00000349505 ITIH6Q6UXX5 1313 aa20.07■□□□□ 0.8
HDAC10-202ENST00000349505 KCNJ18B7U540 433 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 EGFRP00533 1210 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 KCNJ12Q14500 433 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 MICALL2Q8IY33 904 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 KIFC2Q96AC6 838 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 THAP9Q9H5L6 903 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 STK24Q9Y6E0 443 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 COBLO75128 1261 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 CCNE1P24864 410 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 EEF1GP26641 437 aaKnown RBP20.06■□□□□ 0.8
HDAC10-202ENST00000349505 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
HDAC10-202ENST00000349505 STK4Q13043 487 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 PTPN21Q16825 1174 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 TTI2Q6NXR4 508 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 TC2NQ8N9U0 490 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 LENG9Q96B70 501 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 FAM20AQ96MK3 541 aa20.06■□□□□ 0.8
HDAC10-202ENST00000349505 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.06■□□□□ 0.8
HDAC10-202ENST00000349505 MRPL11Q9Y3B7 192 aaKnown RBP20.06■□□□□ 0.8
HDAC10-202ENST00000349505 TRIM49BA6NDI0 452 aa20.05■□□□□ 0.8
HDAC10-202ENST00000349505 HOXA13P31271 388 aaPredicted RBP20.05■□□□□ 0.8
HDAC10-202ENST00000349505 CCT6AP40227 531 aaKnown RBP20.05■□□□□ 0.8
HDAC10-202ENST00000349505 COPB1P53618 953 aaKnown RBP20.05■□□□□ 0.8
HDAC10-202ENST00000349505 PMS1P54277 932 aaKnown RBP20.05■□□□□ 0.8
HDAC10-202ENST00000349505 ZYXQ15942 572 aaKnown RBP20.05■□□□□ 0.8
HDAC10-202ENST00000349505 ECM1Q16610 540 aa20.05■□□□□ 0.8
HDAC10-202ENST00000349505 PRR16Q569H4 304 aa20.05■□□□□ 0.8
HDAC10-202ENST00000349505 HAUS3Q68CZ6 603 aa20.05■□□□□ 0.8
HDAC10-202ENST00000349505 P2RX5Q93086 422 aa20.05■□□□□ 0.8
HDAC10-202ENST00000349505 GJA10Q969M2 543 aa20.05■□□□□ 0.8
HDAC10-202ENST00000349505 GLIS2Q9BZE0 524 aaPredicted RBP20.05■□□□□ 0.8
HDAC10-202ENST00000349505 ARGLU1Q9NWB6 273 aaPredicted RBP20.05■□□□□ 0.8
HDAC10-202ENST00000349505 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.05■□□□□ 0.84e-7■□□□□ 8.7
HDAC10-202ENST00000349505 SPDYE4A6NLX3 237 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 FAM86B1E9PN63 330 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 N4BP3O15049 544 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 STX10O60499 249 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 FAM86B2P0C5J1 330 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 KCNK18Q7Z418 384 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 IRF2BP1Q8IU81 584 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 TMEM139Q8IV31 216 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 LPAR1Q92633 364 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 TRIM47Q96LD4 638 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 CNOT7Q9UIV1 285 aaKnown RBP20.04■□□□□ 0.8
HDAC10-202ENST00000349505 ABCB11O95342 1321 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 SMCHD1A6NHR9 2005 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 GCOM1H8Y6P7 765 aaPredicted RBP20.04■□□□□ 0.8
HDAC10-202ENST00000349505 CTNND1O60716 968 aaKnown RBP20.04■□□□□ 0.8
HDAC10-202ENST00000349505 POLR2MP0CAP2 368 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 FCER1AP12319 257 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 RASSF7Q02833 373 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 SPIRE1Q08AE8 756 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 PSMD2Q13200 908 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 DDX12PQ92771 950 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 ZNF341Q9BYN7 854 aa20.04■□□□□ 0.8
HDAC10-202ENST00000349505 AKR1B15C9JRZ8 316 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms