RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 LSM14BQ9BX40 385 aaKnown RBP17.85■□□□□ 0.45
SCARB1-202ENST00000339570 F8W031 263 aaPredicted RBP17.85■□□□□ 0.45
SCARB1-202ENST00000339570 UBE4AQ14139 1066 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 FAM182BQ5T319 152 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 FAM133AQ8N9E0 248 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 AP1M1Q9BXS5 423 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 LMTK3Q96Q04 1460 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 ZNF335Q9H4Z2 1342 aaPredicted RBP17.84■□□□□ 0.45
SCARB1-202ENST00000339570 RPS8P62241 208 aaKnown RBP17.84■□□□□ 0.45
SCARB1-202ENST00000339570 PPFIA1Q13136 1202 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 FGFBP2Q9BYJ0 223 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 ADAMTSL3P82987 1691 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 TMCO5BA8MYB1 307 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 SLC37A4O43826 429 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 KCNB1Q14721 858 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 SPTY2D1Q68D10 685 aaPredicted RBP17.84■□□□□ 0.45
SCARB1-202ENST00000339570 CNNM4Q6P4Q7 775 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 NEK8Q86SG6 692 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 MTA3Q9BTC8 594 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 TLR10Q9BXR5 811 aa17.84■□□□□ 0.45
SCARB1-202ENST00000339570 ARPP21Q9UBL0 812 aaPredicted RBP17.84■□□□□ 0.45
SCARB1-202ENST00000339570 TARSL2A2RTX5 802 aaKnown RBP17.83■□□□□ 0.45
SCARB1-202ENST00000339570 CALCRLQ16602 461 aa17.83■□□□□ 0.45
SCARB1-202ENST00000339570 TBC1D9BQ66K14 1250 aa17.83■□□□□ 0.45
SCARB1-202ENST00000339570 BARHL2Q9NY43 387 aa17.83■□□□□ 0.45
SCARB1-202ENST00000339570 BCL9O00512 1426 aa17.83■□□□□ 0.45
SCARB1-202ENST00000339570 ORC4O43929 436 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 KIAA0753Q2KHM9 967 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 ODF2Q5BJF6 829 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 NAA35Q5VZE5 725 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 NBPF5PQ86XG9 351 aaPredicted RBP17.83■□□□□ 0.44
SCARB1-202ENST00000339570 RNPC3Q96LT9 517 aaKnown RBP17.83■□□□□ 0.44
SCARB1-202ENST00000339570 NOX5Q96PH1 765 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 KIAA0754O94854 1291 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 LDHBP07195 334 aaKnown RBP17.83■□□□□ 0.44
SCARB1-202ENST00000339570 ACTN1P12814 892 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 DDB1Q16531 1140 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 CEP85LQ5SZL2 805 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 TMED8Q6PL24 325 aaPredicted RBP17.83■□□□□ 0.44
SCARB1-202ENST00000339570 AMOTL1Q8IY63 956 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 DDX12PQ92771 950 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 RPGRIP1Q96KN7 1286 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 MMTAG2Q9BU76 263 aaKnown RBP17.83■□□□□ 0.44
SCARB1-202ENST00000339570 PLAGL2Q9UPG8 496 aa17.83■□□□□ 0.44
SCARB1-202ENST00000339570 USP17L5A8MUK1 530 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 KRT18P05783 430 aaKnown RBP17.82■□□□□ 0.44
SCARB1-202ENST00000339570 KLRC1P26715 233 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 AMPD3Q01432 767 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 EFCAB13Q8IY85 973 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 NOC3LQ8WTT2 800 aaKnown RBP17.82■□□□□ 0.44
SCARB1-202ENST00000339570 TSGA10Q9BZW7 698 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 ATP8A2Q9NTI2 1148 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 FLT1P17948 1338 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 KCNK3O14649 394 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 EIF3HO15372 352 aaKnown RBP eCLIP17.82■□□□□ 0.441e-5■□□□□ 9.1
SCARB1-202ENST00000339570 OPA1O60313 960 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 SLC16A2P36021 539 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 TCERG1LQ5VWI1 586 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 LARP4BQ92615 738 aaKnown RBP17.82■□□□□ 0.44
SCARB1-202ENST00000339570 CCSER1Q9C0I3 900 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 BSDC1Q9NW68 430 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-202ENST00000339570 NUP98P52948 1817 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 CICQ96RK0 1608 aaPredicted RBP17.82■□□□□ 0.44
SCARB1-202ENST00000339570 MYH3P11055 1940 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 ANO9A1A5B4 782 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 ADRA2BP18089 450 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 EPHB4P54760 987 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 REXO1Q8N1G1 1221 aaKnown RBP17.82■□□□□ 0.44
SCARB1-202ENST00000339570 OTUD6BQ8N6M0 293 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 C6orf50Q9HD87 102 aa17.82■□□□□ 0.44
SCARB1-202ENST00000339570 ZNF804BA4D1E1 1349 aa17.81■□□□□ 0.44
SCARB1-202ENST00000339570 SMIM23A6NLE4 172 aa17.81■□□□□ 0.44
SCARB1-202ENST00000339570 E7EVH7 732 aa17.81■□□□□ 0.44
SCARB1-202ENST00000339570 IRX3P78415 501 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-202ENST00000339570 KLHDC7AQ5VTJ3 777 aa17.81■□□□□ 0.44
SCARB1-202ENST00000339570 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-202ENST00000339570 EYA3Q99504 573 aa17.81■□□□□ 0.44
SCARB1-202ENST00000339570 ZNF142P52746 1687 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-202ENST00000339570 A0A087WUV0 522 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-202ENST00000339570 RPS6KA5O75582 802 aa17.81■□□□□ 0.44
SCARB1-202ENST00000339570 GRB10Q13322 594 aa17.81■□□□□ 0.44
SCARB1-202ENST00000339570 FNBP4Q8N3X1 1017 aaPredicted RBP17.81■□□□□ 0.44
SCARB1-202ENST00000339570 EFCC1Q9HA90 598 aa17.81■□□□□ 0.44
SCARB1-202ENST00000339570 CEP104O60308 925 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 IFT88Q13099 833 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 GRM4Q14833 912 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 CFAP221Q4G0U5 840 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 C12orf60Q5U649 245 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 SIK3Q9Y2K2 1263 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 DUOX1Q9NRD9 1551 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 LOC102724159A0A0B4J2E5 919 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 TCP1P17987 556 aaKnown RBP17.8■□□□□ 0.44
SCARB1-202ENST00000339570 PWP2Q15269 919 aaKnown RBP17.8■□□□□ 0.44
SCARB1-202ENST00000339570 MAN2A1Q16706 1144 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 E9PMD0 336 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 GRIN2DO15399 1336 aa17.8■□□□□ 0.44
SCARB1-202ENST00000339570 PRPF4BQ13523 1007 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms