RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 IWS1Q96ST2 819 aa28.44■■■□□ 2.14
CDKN3-202ENST00000335183 CERS4Q9HA82 394 aa28.44■■■□□ 2.14
CDKN3-202ENST00000335183 CTNNA3Q9UI47 895 aa28.44■■■□□ 2.14
CDKN3-202ENST00000335183 TCF20Q9UGU0 1960 aaKnown RBP28.43■■■□□ 2.14
CDKN3-202ENST00000335183 CFBP00751 764 aa28.43■■■□□ 2.14
CDKN3-202ENST00000335183 CCDC155Q8N6L0 562 aa28.43■■■□□ 2.14
CDKN3-202ENST00000335183 CASTP20810 708 aaKnown RBP28.42■■■□□ 2.14
CDKN3-202ENST00000335183 IFIT1BQ5T764 474 aaKnown RBP28.42■■■□□ 2.14
CDKN3-202ENST00000335183 GDF6Q6KF10 455 aaPredicted RBP28.42■■■□□ 2.14
CDKN3-202ENST00000335183 IL27Q8NEV9 243 aa28.42■■■□□ 2.14
CDKN3-202ENST00000335183 TSPYL2Q9H2G4 693 aaPredicted RBP28.42■■■□□ 2.14
CDKN3-202ENST00000335183 CNNM2Q9H8M5 875 aa28.42■■■□□ 2.14
CDKN3-202ENST00000335183 RFXAPO00287 272 aa28.41■■■□□ 2.14
CDKN3-202ENST00000335183 STAG2Q8N3U4 1231 aa28.41■■■□□ 2.14
CDKN3-202ENST00000335183 EXOC6Q8TAG9 804 aa28.41■■■□□ 2.14
CDKN3-202ENST00000335183 CAGE1Q8TC20 777 aa28.41■■■□□ 2.14
CDKN3-202ENST00000335183 PHOSPHO2Q8TCD6 241 aa28.41■■■□□ 2.14
CDKN3-202ENST00000335183 ADAMTS19Q8TE59 1207 aa28.41■■■□□ 2.14
CDKN3-202ENST00000335183 KAT2BQ92831 832 aa28.41■■■□□ 2.14
CDKN3-202ENST00000335183 MRVI1Q9Y6F6 885 aa28.41■■■□□ 2.14
CDKN3-202ENST00000335183 DGKDQ16760 1214 aa28.4■■■□□ 2.14
CDKN3-202ENST00000335183 AMNQ9BXJ7 453 aa28.4■■■□□ 2.14
CDKN3-202ENST00000335183 PXMP2Q9NR77 195 aa28.4■■■□□ 2.14
CDKN3-202ENST00000335183 DDX41Q9UJV9 622 aaKnown RBP28.4■■■□□ 2.14
CDKN3-202ENST00000335183 KIF28PB7ZC32 967 aa28.39■■■□□ 2.14
CDKN3-202ENST00000335183 EIF3JO75822 258 aaKnown RBP28.39■■■□□ 2.14
CDKN3-202ENST00000335183 NR3C2P08235 984 aa28.39■■■□□ 2.14
CDKN3-202ENST00000335183 SKIV2LQ15477 1246 aaKnown RBP28.39■■■□□ 2.14
CDKN3-202ENST00000335183 SESTD1Q86VW0 696 aa28.39■■■□□ 2.14
CDKN3-202ENST00000335183 HERC6Q8IVU3 1022 aa28.39■■■□□ 2.14
CDKN3-202ENST00000335183 AFAP1L1Q8TED9 768 aa28.39■■■□□ 2.14
CDKN3-202ENST00000335183 CTAGE1Q96RT6 745 aa28.39■■■□□ 2.14
CDKN3-202ENST00000335183 ALG1Q9BT22 464 aa28.39■■■□□ 2.14
CDKN3-202ENST00000335183 PRRC2BQ5JSZ5 2229 aaKnown RBP28.39■■■□□ 2.14
CDKN3-202ENST00000335183 CHD7Q9P2D1 2997 aa28.38■■■□□ 2.13
CDKN3-202ENST00000335183 GTPBP6O43824 516 aaPredicted RBP28.38■■■□□ 2.13
CDKN3-202ENST00000335183 BAIAP3O94812 1187 aa28.38■■■□□ 2.13
CDKN3-202ENST00000335183 KCNJ6P48051 423 aa28.38■■■□□ 2.13
CDKN3-202ENST00000335183 IL25Q9H293 177 aa28.38■■■□□ 2.13
CDKN3-202ENST00000335183 KLRF2D3W0D1 207 aa28.37■■■□□ 2.13
CDKN3-202ENST00000335183 MYCLP12524 364 aaPredicted RBP28.37■■■□□ 2.13
CDKN3-202ENST00000335183 SELPP16109 830 aa28.37■■■□□ 2.13
CDKN3-202ENST00000335183 PSEN2P49810 448 aa28.37■■■□□ 2.13
CDKN3-202ENST00000335183 C7orf31Q8N865 590 aa28.37■■■□□ 2.13
CDKN3-202ENST00000335183 ARNTL2Q8WYA1 636 aa28.37■■■□□ 2.13
CDKN3-202ENST00000335183 DHX38Q92620 1227 aaKnown RBP28.37■■■□□ 2.13
CDKN3-202ENST00000335183 HDAC6Q9UBN7 1215 aa28.37■■■□□ 2.13
CDKN3-202ENST00000335183 GTF2IRD1Q9UHL9 959 aa28.37■■■□□ 2.13
CDKN3-202ENST00000335183 BAZ2BQ9UIF8 2168 aaKnown RBP28.37■■■□□ 2.13
CDKN3-202ENST00000335183 EPOPA6NHQ4 379 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 OPLAHO14841 1288 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 ARHGEF15O94989 841 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 ZNF286BP0CG31 522 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 HSD17B4P51659 736 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 LAMC2Q13753 1193 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 LRRC8DQ7L1W4 858 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 DHX37Q8IY37 1157 aaKnown RBP28.36■■■□□ 2.13
CDKN3-202ENST00000335183 UHRF1Q96T88 793 aaPredicted RBP28.36■■■□□ 2.13
CDKN3-202ENST00000335183 KATNAL1Q9BW62 490 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 MTCH2Q9Y6C9 303 aa28.36■■■□□ 2.13
CDKN3-202ENST00000335183 SORBS3O60504 671 aa28.35■■■□□ 2.13
CDKN3-202ENST00000335183 TAP1Q03518 808 aa28.35■■■□□ 2.13
CDKN3-202ENST00000335183 MFSD10Q14728 455 aa28.35■■■□□ 2.13
CDKN3-202ENST00000335183 SEC23AQ15436 765 aa28.35■■■□□ 2.13
CDKN3-202ENST00000335183 CYB5R4Q7L1T6 521 aa28.35■■■□□ 2.13
CDKN3-202ENST00000335183 EMID1Q96A84 441 aaPredicted RBP28.35■■■□□ 2.13
CDKN3-202ENST00000335183 MAD2L2Q9UI95 211 aa28.35■■■□□ 2.13
CDKN3-202ENST00000335183 PCDHA1Q9Y5I3 950 aa28.35■■■□□ 2.13
CDKN3-202ENST00000335183 COL4A4P53420 1690 aaPredicted RBP28.35■■■□□ 2.13
CDKN3-202ENST00000335183 ZBTB5O15062 677 aa28.34■■■□□ 2.13
CDKN3-202ENST00000335183 TLL1O43897 1013 aa28.34■■■□□ 2.13
CDKN3-202ENST00000335183 PPP1R11O60927 126 aaPredicted RBP28.34■■■□□ 2.13
CDKN3-202ENST00000335183 KIAA0753Q2KHM9 967 aa28.34■■■□□ 2.13
CDKN3-202ENST00000335183 HOMER1Q86YM7 354 aa28.34■■■□□ 2.13
CDKN3-202ENST00000335183 PPTC7Q8NI37 304 aa28.34■■■□□ 2.13
CDKN3-202ENST00000335183 PDCD2LQ9BRP1 358 aa28.34■■■□□ 2.13
CDKN3-202ENST00000335183 CKBP12277 381 aa28.33■■■□□ 2.13
CDKN3-202ENST00000335183 HOXA13P31271 388 aaPredicted RBP28.33■■■□□ 2.13
CDKN3-202ENST00000335183 WDR5P61964 334 aaKnown RBP28.33■■■□□ 2.13
CDKN3-202ENST00000335183 TFF2Q03403 129 aa28.33■■■□□ 2.13
CDKN3-202ENST00000335183 TRDNQ13061 729 aa28.33■■■□□ 2.13
CDKN3-202ENST00000335183 GPNMBQ14956 572 aa28.33■■■□□ 2.13
CDKN3-202ENST00000335183 KRT40Q6A162 431 aa28.33■■■□□ 2.13
CDKN3-202ENST00000335183 TMCO2Q7Z6W1 182 aaPredicted RBP28.33■■■□□ 2.13
CDKN3-202ENST00000335183 MTMR8Q96EF0 704 aa28.33■■■□□ 2.13
CDKN3-202ENST00000335183 GHRHRQ02643 423 aa28.32■■■□□ 2.12
CDKN3-202ENST00000335183 CNKSR3Q6P9H4 555 aa28.32■■■□□ 2.12
CDKN3-202ENST00000335183 ZBED2Q9BTP6 218 aa28.32■■■□□ 2.12
CDKN3-202ENST00000335183 MAP3K20Q9NYL2 800 aaKnown RBP28.32■■■□□ 2.12
CDKN3-202ENST00000335183 PALM3A6NDB9 673 aaPredicted RBP28.31■■■□□ 2.12
CDKN3-202ENST00000335183 NBNO60934 754 aa28.31■■■□□ 2.12
CDKN3-202ENST00000335183 PARNO95453 639 aaKnown RBP28.31■■■□□ 2.12
CDKN3-202ENST00000335183 F2P00734 622 aa28.31■■■□□ 2.12
CDKN3-202ENST00000335183 POU3F3P20264 500 aaPredicted RBP28.31■■■□□ 2.12
CDKN3-202ENST00000335183 RBL2Q08999 1139 aa28.31■■■□□ 2.12
CDKN3-202ENST00000335183 PGM5Q15124 567 aa28.31■■■□□ 2.12
CDKN3-202ENST00000335183 ZFP91Q96JP5 570 aaPredicted RBP28.31■■■□□ 2.12
CDKN3-202ENST00000335183 HAS3O00219 553 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 RGS20O76081 388 aa28.3■■■□□ 2.12
CDKN3-202ENST00000335183 GGPS1O95749 300 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms