RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 EIF4A3P38919 411 aaKnown RBP18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 RNF34Q969K3 372 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 CDK8P49336 464 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 ZNF131P52739 623 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 MFAP3P55082 362 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 ARID5BQ14865 1188 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 PPP4R3CPQ6ZMV5 832 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 CYB5R4Q7L1T6 521 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 ANKRD42Q8N9B4 389 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 SMCR8Q8TEV9 937 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 RSAD2Q8WXG1 361 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 ST7Q9NRC1 585 aa18.66■□□□□ 0.58
TRAPPC11-201ENST00000334690 REREQ9P2R6 1566 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 PALLDQ8WX93 1383 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 USP17L3A6NCW0 530 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 USP17L4A6NCW7 530 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 HGSO14964 777 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 USP17L1Q7RTZ2 530 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 POMGNT1Q8WZA1 660 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 ATP6V0A1Q93050 837 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 KLHL14Q9P2G3 628 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 PI4KBQ9UBF8 816 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 PHBP35232 272 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 PFKFB3Q16875 520 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 LMNTD2Q8IXW0 634 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 MB21D1Q8N884 522 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 MAGOHBQ96A72 148 aaKnown RBP18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 ZNF577Q9BSK1 485 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 GOLPH3LQ9H4A5 285 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 MLXIPQ9HAP2 919 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 LY9Q9HBG7 655 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 HSPA6P17066 643 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 MAN1A1P33908 653 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 SLC16A2P36021 539 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 NEDD4P46934 1319 aa18.65■□□□□ 0.58
TRAPPC11-201ENST00000334690 E9PCH4 1651 aa18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 PNMA6FA0A0J9YX94 578 aa18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 CCDC160A6NGH7 325 aa18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 TROVE2P10155 538 aaKnown RBP eCLIP18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 PCK1P35558 622 aa18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 VPS41P49754 854 aa18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 PPARDQ03181 441 aa18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 BRINP3Q76B58 766 aa18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 ATP2A3Q93084 1043 aa18.64■□□□□ 0.58
TRAPPC11-201ENST00000334690 SERPING1P05155 500 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 ADAT2Q7Z6V5 191 aaKnown RBP18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 ARHGEF2Q92974 986 aaKnown RBP18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 DAAM1Q9Y4D1 1078 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 HNRNPDLO14979 420 aaKnown RBP18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 THAP12O43422 761 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 BUB1BO60566 1050 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 PLA2G4BP0C869 781 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 SPICE1Q8N0Z3 855 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 VPS52Q8N1B4 723 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 EXOC4Q96A65 974 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 FAM81BQ96LP2 452 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 EPB41L5Q9HCM4 733 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 ARHGEF40Q8TER5 1519 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 TNNC2P02585 160 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 KIF11P52732 1056 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 NAA35Q5VZE5 725 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 FBXO38Q6PIJ6 1188 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 TMEM206Q9H813 350 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 CSADQ9Y600 493 aa18.64■□□□□ 0.57
TRAPPC11-201ENST00000334690 CYP27A1Q02318 531 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 TSNAXIP1Q2TAA8 658 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 CTAGE3PQ8IX95 158 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 PALM2Q8IXS6 379 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 SMC1BQ8NDV3 1235 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 MGARPQ8TDB4 240 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 PBKQ96KB5 322 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 MESDQ14696 234 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 PPP2R5AQ15172 486 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 ENAHQ8N8S7 591 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 TRIM11Q96F44 468 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 LMNB2Q03252 620 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 CASC4Q6P4E1 433 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 CCDC125Q86Z20 511 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 BAIAP2L1Q9UHR4 511 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 GDAQ9Y2T3 454 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 TSPOAP1O95153 1857 aa18.63■□□□□ 0.57
TRAPPC11-201ENST00000334690 ATF2P15336 505 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 POLGP54098 1239 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 SEMA3FQ13275 785 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 PRKG1Q13976 671 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 SDCCAG8Q86SQ7 713 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 ACCSQ96QU6 501 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 NRBP2Q9NSY0 501 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 LGALS16A8MUM7 142 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 SARNPP82979 210 aaKnown RBP18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 ANKRD35Q8N283 1001 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 CAPN7Q9Y6W3 813 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 LRRIQ4A6NIV6 560 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 RNF8O76064 485 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 TMEM191BP0C7N4 346 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 ATF7P17544 494 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 FOXO4P98177 505 aa18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 EXOSC10Q01780 885 aaKnown RBP18.62■□□□□ 0.57
TRAPPC11-201ENST00000334690 DMTNQ08495 405 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms