RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 FAM81AQ8TBF8 368 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 EZH1Q92800 747 aaPredicted RBP9.22□□□□□ -0.93
SKA2-201ENST00000330137 NAF1Q96HR8 494 aaKnown RBP9.22□□□□□ -0.93
SKA2-201ENST00000330137 RAB17Q9H0T7 212 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 LRWD1Q9UFC0 647 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 CAPN6Q9Y6Q1 641 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 LAMB4A4D0S4 1761 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 CASZ1Q86V15 1759 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 A0A0G2JLW4 131 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 BICDL2A1A5D9 508 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 BCL9O00512 1426 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 GSTA2P09210 222 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ALDH3A1P30838 453 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 HPDP32754 393 aaPredicted RBP9.22□□□□□ -0.93
SKA2-201ENST00000330137 CTNNA1P35221 906 aaKnown RBP9.22□□□□□ -0.93
SKA2-201ENST00000330137 AFMP43652 599 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 TRAPPC10P48553 1259 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 LACTBP83111 547 aaPredicted RBP9.22□□□□□ -0.93
SKA2-201ENST00000330137 GALNTL6Q49A17 601 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ODF2Q5BJF6 829 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ANKRD20A2Q5SQ80 823 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ANKRD20A1Q5TYW2 823 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ANKRD20A3Q5VUR7 823 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 PDXDC2PQ6P474 469 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 SPATA21Q7Z572 469 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ARHGAP22Q7Z5H3 698 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 SYMPKQ92797 1274 aaKnown RBP9.22□□□□□ -0.93
SKA2-201ENST00000330137 CNNM2Q9H8M5 875 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 ARHGEF3Q9NR81 526 aa9.22□□□□□ -0.93
SKA2-201ENST00000330137 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
SKA2-201ENST00000330137 SPATA31A6Q5VVP1 1343 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 BTNL10A8MVZ5 291 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 CCDC188H7C350 402 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 PSMA7O14818 248 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 DIAPH2O60879 1101 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 CAND2O75155 1236 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 CLTAP09496 248 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 GBP1P32455 592 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 CUL3Q13618 768 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 PDIA6Q15084 440 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 THEMIS2Q5TEJ8 643 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 KLHDC7AQ5VTJ3 777 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 NFRKBQ6P4R8 1299 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 KLHDC4Q8TBB5 520 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 MIPOL1Q8TD10 442 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 SEC14L1Q92503 715 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 PGM2Q96G03 612 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 GORASP1Q9BQQ3 440 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 LY9Q9HBG7 655 aa9.21□□□□□ -0.93
SKA2-201ENST00000330137 ZNF219Q9P2Y4 722 aaPredicted RBP9.21□□□□□ -0.93
SKA2-201ENST00000330137 TIAM2Q8IVF5 1701 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 XDHP47989 1333 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 A0A087X0B3 334 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 SMIM24O75264 130 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 RPN1P04843 607 aaKnown RBP9.21□□□□□ -0.94
SKA2-201ENST00000330137 CHGBP05060 677 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 RXRBP28702 533 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 CTCFP49711 727 aaPredicted RBP9.21□□□□□ -0.94
SKA2-201ENST00000330137 CCDC84Q86UT8 332 aaPredicted RBP9.21□□□□□ -0.94
SKA2-201ENST00000330137 ATL2Q8NHH9 583 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 IFT81Q8WYA0 676 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 SYN2Q92777 582 aaPredicted RBP9.21□□□□□ -0.94
SKA2-201ENST00000330137 PHKBQ93100 1093 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 PBKQ96KB5 322 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 C8orf37Q96NL8 207 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 RAB3IPQ96QF0 476 aaPredicted RBP9.21□□□□□ -0.94
SKA2-201ENST00000330137 CCDC28BQ9BUN5 200 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 SLC26A6Q9BXS9 759 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 OSBPL1AQ9BXW6 950 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 YIPF3Q9GZM5 350 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 VCXQ9H320 206 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 MAGEF1Q9HAY2 307 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 WDR35Q9P2L0 1181 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 SLC12A7Q9Y666 1083 aa9.21□□□□□ -0.94
SKA2-201ENST00000330137 AFDNP55196 1824 aaKnown RBP9.21□□□□□ -0.94
SKA2-201ENST00000330137 SPDYE3A6NKU9 549 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 ZNF263O14978 683 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 RNMTO43148 476 aaKnown RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 PRPF3O43395 683 aaKnown RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 ANXA1P04083 346 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 KIF11P52732 1056 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 PROSER3Q2NL68 480 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 CCDC152Q4G0S7 254 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 FKBP15Q5T1M5 1219 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 ARL6IP4Q66PJ3 421 aaKnown RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 FOXR2Q6PJQ5 311 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 PNMA8AQ86V59 439 aaPredicted RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 KIRREL3Q8IZU9 778 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 LZICQ8WZA0 190 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 INPP4AQ96PE3 977 aaPredicted RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 TUBGCP2Q9BSJ2 902 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.2□□□□□ -0.94
SKA2-201ENST00000330137 STMN4Q9H169 189 aaPredicted RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 PANK4Q9NVE7 773 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 RPS6KL1Q9Y6S9 549 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 DUSP10Q9Y6W6 482 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 ATP5HO75947 161 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 MOCS3O95396 460 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 ACADSP16219 412 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 MMP13P45452 471 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms