RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 HIP1RO75146 1068 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 CHGBP05060 677 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 PRDX5P30044 214 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 ADD2P35612 726 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 GPR162Q16538 588 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 HOOK3Q86VS8 718 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 JAKMIP2Q96AA8 810 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 FAM205AQ6ZU69 1335 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 CYP7A1P22680 504 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 C1QTNF12Q5T7M4 302 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 KCNG4Q8TDN1 519 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 APPBP2Q92624 585 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 MMS19Q96T76 1030 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 PHACTR1Q9C0D0 580 aa12.86□□□□□ -0.35
LDLRAD3-201ENST00000315571 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 N4BP3O15049 544 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 SCTRP47872 440 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 UBE3CQ15386 1083 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 ZMYM1Q5SVZ6 1142 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 OR8K1Q8NGG5 319 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 RRP36Q96EU6 259 aaKnown RBP12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 HELLSQ9NRZ9 838 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 LTBP3Q9NS15 1303 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 CYFIP2Q96F07 1278 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 ZNRF3Q9ULT6 936 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 STXBP3O00186 592 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 YEATS4O95619 227 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 ATP4AP20648 1035 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 DRP2Q13474 957 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 STRIP1Q5VSL9 837 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 ADALQ6DHV7 355 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 WDR93Q6P2C0 686 aa12.85□□□□□ -0.35
LDLRAD3-201ENST00000315571 RBM47A0AV96 593 aaKnown RBP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 B4DLN1 442 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 F8W031 263 aaPredicted RBP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 IKBKBO14920 756 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 RAD17O75943 681 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 MAGEA8P43361 318 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 GSTO1P78417 241 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 RBL2Q08999 1139 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 SLC5A9Q2M3M2 681 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCDC129Q6ZRS4 1044 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 ZNF365Q70YC5 407 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 MSL3Q8N5Y2 521 aaKnown RBP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 GBP5Q96PP8 586 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 KCNQ5Q9NR82 932 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 SHOX2O60902 331 aaPredicted RBP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 VIMP08670 466 aaKnown RBP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 MECOMQ03112 1051 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCDC6Q16204 474 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 PTGISQ16647 500 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCNI2Q6ZMN8 369 aaPredicted RBP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 TC2NQ8N9U0 490 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 CASP14P31944 242 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 C8orf74Q6P047 294 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 RAB11FIP4Q86YS3 637 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 SAMD15Q9P1V8 674 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 CORO1CQ9ULV4 474 aaPredicted RBP12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 CEP131Q9UPN4 1083 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
LDLRAD3-201ENST00000315571 GMNCA6NCL1 334 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 SMIM23A6NLE4 172 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 LDHCP07864 332 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 RAD9BQ6WBX8 426 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 ANKRD23Q86SG2 305 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 CNGA4Q8IV77 575 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 SLF2Q8IX21 1173 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 CCHCR1Q8TD31 782 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 OSBP2Q969R2 916 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 NEK1Q96PY6 1258 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 NUP58Q9BVL2 599 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 MXD3Q9BW11 206 aa12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 NCOA5Q9HCD5 579 aaKnown RBP12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.35
LDLRAD3-201ENST00000315571 MAST3O60307 1309 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 FAM107AO95990 144 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 MYL1P05976 194 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 HNRNPCP07910 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 MAB21L3Q8N8X9 362 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 NSUN4Q96CB9 384 aaKnown RBP12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 FGD4Q96M96 766 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 SELENOSQ9BQE4 189 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 YDJCA8MPS7 323 aa12.83□□□□□ -0.36
LDLRAD3-201ENST00000315571 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms