RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 ARPP21Q9UBL0 812 aaPredicted RBP20.89■□□□□ 0.94
HERPUD2-201ENST00000311350 CYP2D7A0A087X1C5 515 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 USP17L12C9JPN9 530 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 USP17L21D6R901 530 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 SMIM22K7EJ46 135 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 SRGNP10124 158 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 RDXP35241 583 aaKnown RBP20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 KRT83P78385 493 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 NFRKBQ6P4R8 1299 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 RETREG2Q8NC44 543 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 ANKS1AQ92625 1134 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 NUP58Q9BVL2 599 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 CCSER1Q9C0I3 900 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 CUEDC2Q9H467 287 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 MLXIPQ9HAP2 919 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 CAPN6Q9Y6Q1 641 aa20.89■□□□□ 0.93
HERPUD2-201ENST00000311350 LAD1O00515 517 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 C21orf2O43822 256 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 FAM153BP0C7A2 387 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 GYG1P46976 350 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 NEDD9Q14511 834 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 FAM153CQ494X1 144 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 FBXO33Q7Z6M2 555 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 CCDC13Q8IYE1 715 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 LRWD1Q9UFC0 647 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 FAM153AQ9UHL3 310 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 SNX12Q9UMY4 172 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 PCDHA4Q9UN74 947 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 RASSF10A6NK89 507 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 ZNF263O14978 683 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 RHOBTB3O94955 611 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 PDHBP11177 359 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 PPP1R2P41236 205 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 DNM2P50570 870 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 TSR1Q2NL82 804 aaKnown RBP20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 PREPLQ4J6C6 727 aaPredicted RBP20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 HAUS3Q68CZ6 603 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 CCDC70Q6NSX1 233 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 ZNF384Q8TF68 577 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 EPN3Q9H201 632 aa20.88■□□□□ 0.93
HERPUD2-201ENST00000311350 MYH13Q9UKX3 1938 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 ATXN2Q99700 1313 aaKnown RBP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 ZNF233A6NK53 670 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 SSBP05455 408 aaKnown RBP eCLIP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 CCDC40Q4G0X9 1142 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 STYK1Q6J9G0 422 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 MIEF2Q96C03 454 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 NSUN4Q96CB9 384 aaKnown RBP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 IQCDQ96DY2 449 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 MASTLQ96GX5 879 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 DHTKD1Q96HY7 919 aaPredicted RBP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 VCPKMTQ9H867 229 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 SLC40A1Q9NP59 571 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 ZSCAN5CA6NGD5 496 aaPredicted RBP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 M0R2N6 131 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 RASSF9O75901 435 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 PLEKP08567 350 aaPredicted RBP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 PRPHP41219 470 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 GNAQP50148 359 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 EPHB4P54760 987 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 SPRED3Q2MJR0 410 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 CCDC178Q5BJE1 867 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 FAM84BQ96KN1 310 aaPredicted RBP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 CCDC43Q96MW1 224 aaKnown RBP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 CCT8L2Q96SF2 557 aa20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 DCP1AQ9NPI6 582 aaPredicted RBP20.87■□□□□ 0.93
HERPUD2-201ENST00000311350 ESYT3A0FGR9 886 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 KLRG2A4D1S0 409 aaPredicted RBP20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 B4DLN1 442 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 PSMA7O14818 248 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 NCK2O43639 380 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 ALS2CLQ60I27 953 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 RPAINQ86UA6 219 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 CCDC170Q8IYT3 715 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 PURBQ96QR8 312 aaKnown RBP20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 MAST2Q6P0Q8 1798 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 COL11A2P13942 1736 aaPredicted RBP20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 ANO9A1A5B4 782 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 KLRC4O43908 158 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 MOCS3O95396 460 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 PTGISQ16647 500 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 NAALADL2Q58DX5 795 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 DTHD1Q6ZMT9 781 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 KIRREL3Q8IZU9 778 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 GIMAP8Q8ND71 665 aaPredicted RBP20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 KBTBD4Q9NVX7 518 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 MAGEC2Q9UBF1 373 aaPredicted RBP20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 ODF2LQ9ULJ1 636 aa20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 BAZ2AQ9UIF9 1905 aaKnown RBP20.86■□□□□ 0.93
HERPUD2-201ENST00000311350 CYLC1P35663 651 aaPredicted RBP20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 CDK17Q00537 523 aa20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 IQCEQ6IPM2 695 aa20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 DGKHQ86XP1 1220 aa20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 CEP57Q86XR8 500 aa20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 TTYH3Q9C0H2 523 aa20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 STIM2Q9P246 746 aa20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 COL4A1P02462 1669 aa20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 SMTNP53814 917 aa20.85■□□□□ 0.93
HERPUD2-201ENST00000311350 C9orf131Q5VYM1 1079 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms