RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 MB21D2Q8IYB1 491 aaPredicted RBP6.5□□□□□ -1.37
PATL1-201ENST00000300146 TDHQ8IZJ6 230 aa6.5□□□□□ -1.37
PATL1-201ENST00000300146 MYOCDQ8IZQ8 938 aa6.5□□□□□ -1.37
PATL1-201ENST00000300146 AIFM3Q96NN9 605 aa6.5□□□□□ -1.37
PATL1-201ENST00000300146 VPS54Q9P1Q0 977 aa6.5□□□□□ -1.37
PATL1-201ENST00000300146 RFXAPO00287 272 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 TLR3O15455 904 aaKnown RBP6.49□□□□□ -1.37
PATL1-201ENST00000300146 KIAA0753Q2KHM9 967 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 RETREG2Q8NC44 543 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 PDLIM7Q9NR12 457 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 DOCK1Q14185 1865 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 SMCO2A6NFE2 343 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 FDX1P10109 184 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 CDC27P30260 824 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 PBX2P40425 430 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 LONRF3Q496Y0 759 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 SCLT1Q96NL6 688 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 ROBO3Q96MS0 1386 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 DNAJC25-GNG10A0A024R161 153 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 A0A087WWV3 80 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 PNMA6FA0A0J9YX94 578 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 SH2B2O14492 632 aaPredicted RBP6.49□□□□□ -1.37
PATL1-201ENST00000300146 NEK4P51957 841 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 NLRP5P59047 1200 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 ZRSR1Q15695 479 aaKnown RBP6.49□□□□□ -1.37
PATL1-201ENST00000300146 TAPT1Q6NXT6 567 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 APOA5Q6Q788 366 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 RNF169Q8NCN4 708 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.49□□□□□ -1.372e-7■■□□□ 12.8
PATL1-201ENST00000300146 PDCD2LQ9BRP1 358 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 SETD4Q9NVD3 440 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 CXXC1Q9P0U4 656 aaPredicted RBP6.49□□□□□ -1.37
PATL1-201ENST00000300146 HDAC6Q9UBN7 1215 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 SNX14Q9Y5W7 946 aa6.49□□□□□ -1.37
PATL1-201ENST00000300146 B4GALT4O60513 344 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 ADAMTS4O75173 837 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 CA8P35219 290 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 THPOP40225 353 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 OAZ1P54368 228 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 FAAP100Q0VG06 881 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 NECTIN1Q15223 517 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 IQSEC1Q6DN90 963 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 MYLIPQ8WY64 445 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 PXMP2Q9NR77 195 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 TCP11L1Q9NUJ3 509 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 KCNJ14Q9UNX9 436 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 TRPC6Q9Y210 931 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 CYP46A1Q9Y6A2 500 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 RAD50Q92878 1312 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 ARVCFO00192 962 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 SEC24BO95487 1268 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 FPGSQ05932 587 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 NFX1Q12986 1120 aaKnown RBP6.48□□□□□ -1.37
PATL1-201ENST00000300146 GRM4Q14833 912 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 DUSP28Q4G0W2 176 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 ANKLE1Q8NAG6 615 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 SPRYD3Q8NCJ5 442 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 TRAPPC12Q8WVT3 735 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 PDRG1Q9NUG6 133 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 MCM3APO60318 1980 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 PALM3A6NDB9 673 aaPredicted RBP6.48□□□□□ -1.37
PATL1-201ENST00000300146 GH1P01241 217 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 PCP11498 1178 aaKnown RBP6.48□□□□□ -1.37
PATL1-201ENST00000300146 PTGISQ16647 500 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 TKFCQ3LXA3 575 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 METTL13Q8N6R0 699 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 PRDM12Q9H4Q4 367 aa6.48□□□□□ -1.37
PATL1-201ENST00000300146 A0A0U1RQG5 324 aaPredicted RBP6.47□□□□□ -1.37
PATL1-201ENST00000300146 CCND2P30279 289 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 ARHGAP4P98171 946 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 DIS3Q9Y2L1 958 aaKnown RBP6.47□□□□□ -1.37
PATL1-201ENST00000300146 ATP9AO75110 1047 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 FGRP09769 529 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 GNAQP50148 359 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 CPT1AP50416 773 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 SP2Q02086 613 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 GNL2Q13823 731 aaKnown RBP6.47□□□□□ -1.37
PATL1-201ENST00000300146 GNPTABQ3T906 1256 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 PRR16Q569H4 304 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 KRT40Q6A162 431 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 BTNL9Q6UXG8 535 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 TMTC2Q8N394 836 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 ATP6V0A1Q93050 837 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 TMEM87BQ96K49 555 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 GDF15Q99988 308 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 FOXD4L6Q3SYB3 417 aaPredicted RBP6.47□□□□□ -1.37
PATL1-201ENST00000300146 WWC2Q6AWC2 1192 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 FOXD4L3Q6VB84 417 aaPredicted RBP6.47□□□□□ -1.37
PATL1-201ENST00000300146 NLRX1Q86UT6 975 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 ARNTL2Q8WYA1 636 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 ALDH8A1Q9H2A2 487 aaPredicted RBP6.47□□□□□ -1.37
PATL1-201ENST00000300146 SUGCTQ9HAC7 445 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 SLC28A3Q9HAS3 691 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 VTA1Q9NP79 307 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 PCDHA6Q9UN73 950 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 PCDHA8Q9Y5H6 950 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 SYNGAP1Q96PV0 1343 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 NAV1Q8NEY1 1877 aa6.47□□□□□ -1.37
PATL1-201ENST00000300146 ATP2A1O14983 1001 aa6.46□□□□□ -1.37
PATL1-201ENST00000300146 CSDE1O75534 798 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms