RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
CNOT9-202ENST00000295701 RANBP17Q9H2T7 1088 aaKnown RBP10.97□□□□□ -0.65
CNOT9-202ENST00000295701 TMEM134Q9H6X4 195 aa10.97□□□□□ -0.65
CNOT9-202ENST00000295701 TRMT13Q9NUP7 481 aaKnown RBP10.97□□□□□ -0.65
CNOT9-202ENST00000295701 PRRC2BQ5JSZ5 2229 aaKnown RBP10.97□□□□□ -0.65
CNOT9-202ENST00000295701 SCN10AQ9Y5Y9 1956 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 RCCD1A6NED2 376 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 CABYRO75952 493 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 ICAM1P05362 532 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 ALDH5A1P51649 535 aaPredicted RBP10.96□□□□□ -0.65
CNOT9-202ENST00000295701 HIC1Q14526 733 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 ANKRD45Q5TZF3 282 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 SYDE2Q5VT97 1194 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 MORC4Q8TE76 937 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 DCAF4Q8WV16 495 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 ZNF516Q92618 1163 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 SYMPKQ92797 1274 aaKnown RBP10.96□□□□□ -0.65
CNOT9-202ENST00000295701 COPS5Q92905 334 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 FAM227BQ96M60 508 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 TMEM47Q9BQJ4 181 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 WDR11Q9BZH6 1224 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 VTA1Q9NP79 307 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 MSRAQ9UJ68 235 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 ANAPC4Q9UJX5 808 aa10.96□□□□□ -0.65
CNOT9-202ENST00000295701 NCOR1O75376 2440 aa10.96□□□□□ -0.66
CNOT9-202ENST00000295701 A0A0D9SFI3 127 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 PTPDC1A2A3K4 754 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 RFXAPO00287 272 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 ORC4O43929 436 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 ZEB2O60315 1214 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 FGAP02671 866 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 MYL3P08590 195 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 FGRP09769 529 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 CALML3P27482 149 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 HAND2P61296 217 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 TTLL4Q14679 1199 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 ALX1Q15699 326 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 DUSP28Q4G0W2 176 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 BTNL9Q6UXG8 535 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 SLC30A10Q6XR72 485 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 CLEC4DQ8WXI8 215 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 ALDH8A1Q9H2A2 487 aaPredicted RBP10.95□□□□□ -0.66
CNOT9-202ENST00000295701 TOMM22Q9NS69 142 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 RAPGEFL1Q9UHV5 662 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 Q9Y3F1 56 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 MYH7BA7E2Y1 1941 aa10.95□□□□□ -0.66
CNOT9-202ENST00000295701 MYH6P13533 1939 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 ZBBXA8MT70 800 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 TNFRSF10AO00220 468 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 RAB30Q15771 203 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 AKNAD1Q5T1N1 836 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 DEFB128Q7Z7B8 93 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 ZNF589Q86UQ0 364 aaPredicted RBP10.94□□□□□ -0.66
CNOT9-202ENST00000295701 OR6J1Q8NGC5 347 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 TBC1D5Q92609 795 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 PRR14Q9BWN1 585 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 CPVLQ9H3G5 476 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 SLC28A3Q9HAS3 691 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 SLC4A7Q9Y6M7 1214 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 XIRP2A4UGR9 3374 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 PTPRSQ13332 1948 aa10.94□□□□□ -0.66
CNOT9-202ENST00000295701 TNKSO95271 1327 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
CNOT9-202ENST00000295701 ARHGEF15O94989 841 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 HSPD1P10809 573 aaKnown RBP10.93□□□□□ -0.66
CNOT9-202ENST00000295701 PDHBP11177 359 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 TOP1P11387 765 aaKnown RBP10.93□□□□□ -0.66
CNOT9-202ENST00000295701 PDE1AP54750 535 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 COPS2P61201 443 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 PURAQ00577 322 aaKnown RBP10.93□□□□□ -0.66
CNOT9-202ENST00000295701 NMIQ13287 307 aaPredicted RBP10.93□□□□□ -0.66
CNOT9-202ENST00000295701 NBPF20Q3BBV1 942 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
CNOT9-202ENST00000295701 MICALL1Q8N3F8 863 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 EVI5LQ96CN4 794 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 ASB2Q96Q27 587 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 CRBNQ96SW2 442 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 UBA5Q9GZZ9 404 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 CERS4Q9HA82 394 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 HELLSQ9NRZ9 838 aa10.93□□□□□ -0.66
CNOT9-202ENST00000295701 EPOPA6NHQ4 379 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 ARIH2O95376 493 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 OATP04181 439 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 GOLGA8HP0CJ92 632 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 ATP2A2P16615 1042 aaKnown RBP10.92□□□□□ -0.66
CNOT9-202ENST00000295701 RPS6P62753 249 aaKnown RBP10.92□□□□□ -0.66
CNOT9-202ENST00000295701 MCMDC2Q4G0Z9 681 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 FAM47CQ5HY64 1035 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 KRT40Q6A162 431 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 RNF207Q6ZRF8 634 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 ATXN2LQ8WWM7 1075 aaKnown RBP10.92□□□□□ -0.66
CNOT9-202ENST00000295701 NECAB3Q96P71 396 aaPredicted RBP10.92□□□□□ -0.66
CNOT9-202ENST00000295701 ZKSCAN3Q9BRR0 538 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 MTG1Q9BT17 334 aaPredicted RBP10.92□□□□□ -0.66
CNOT9-202ENST00000295701 MTIF3Q9H2K0 278 aaKnown RBP10.92□□□□□ -0.66
CNOT9-202ENST00000295701 TCP11L1Q9NUJ3 509 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 THEGQ9P2T0 379 aa10.92□□□□□ -0.66
CNOT9-202ENST00000295701 ADD3Q9UEY8 706 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms