RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 NUDT12Q9BQG2 462 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 TANGO6Q9C0B7 1094 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 KRT14P02533 472 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 RNASE9P60153 205 aaKnown RBP18.9■□□□□ 0.62
SPG7-201ENST00000268704 DDB1Q16531 1140 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 TDRD12Q587J7 1177 aaKnown RBP18.9■□□□□ 0.62
SPG7-201ENST00000268704 MARCH10Q8NA82 808 aaPredicted RBP18.9■□□□□ 0.62
SPG7-201ENST00000268704 GJA10Q969M2 543 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 GPR101Q96P66 508 aaPredicted RBP18.9■□□□□ 0.62
SPG7-201ENST00000268704 ALS2CR12Q96Q35 445 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 UBA5Q9GZZ9 404 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 LIG3P49916 1009 aa18.89■□□□□ 0.62
SPG7-201ENST00000268704 PPARDQ03181 441 aa18.89■□□□□ 0.62
SPG7-201ENST00000268704 C8orf74Q6P047 294 aa18.89■□□□□ 0.62
SPG7-201ENST00000268704 MICALL1Q8N3F8 863 aa18.89■□□□□ 0.62
SPG7-201ENST00000268704 FBXO41Q8TF61 875 aa18.89■□□□□ 0.62
SPG7-201ENST00000268704 PPM1EQ8WY54 764 aa18.89■□□□□ 0.62
SPG7-201ENST00000268704 PIGSQ96S52 555 aa18.89■□□□□ 0.62
SPG7-201ENST00000268704 MAGEF1Q9HAY2 307 aa18.89■□□□□ 0.62
SPG7-201ENST00000268704 PACSIN2Q9UNF0 486 aaPredicted RBP18.89■□□□□ 0.62
SPG7-201ENST00000268704 SLC37A4O43826 429 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 FAM153BP0C7A2 387 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 RASA1P20936 1047 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 ATP1A2P50993 1020 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 PPFIA1Q13136 1202 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 ENOX2Q16206 610 aaKnown RBP18.89■□□□□ 0.61
SPG7-201ENST00000268704 MAN2A1Q16706 1144 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 FAM153CQ494X1 144 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 SV2BQ7L1I2 683 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 KCNK18Q7Z418 384 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 CALML4Q96GE6 196 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 PNMA5Q96PV4 448 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 FAM153AQ9UHL3 310 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 GLI1P08151 1106 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 AMPD3Q01432 767 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 PDCLQ13371 301 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 KLHDC7AQ5VTJ3 777 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 GALNT17Q6IS24 598 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 ANKS1AQ92625 1134 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 EFCC1Q9HA90 598 aa18.89■□□□□ 0.61
SPG7-201ENST00000268704 FTCDO95954 541 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 TCP1P17987 556 aaKnown RBP18.88■□□□□ 0.61
SPG7-201ENST00000268704 ZNF572Q7Z3I7 529 aaPredicted RBP18.88■□□□□ 0.61
SPG7-201ENST00000268704 CACNA2D4Q7Z3S7 1137 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 ZIM3Q96PE6 472 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 SH3GL2Q99962 352 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 TDP2O95551 362 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 CARSP49589 748 aaKnown RBP18.88■□□□□ 0.61
SPG7-201ENST00000268704 EPHB4P54760 987 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 TRADDQ15628 312 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 TADA2BQ86TJ2 420 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 NFU1Q9UMS0 254 aa18.88■□□□□ 0.61
SPG7-201ENST00000268704 EIF3HO15372 352 aaKnown RBP eCLIP18.87■□□□□ 0.612e-6■■■■□ 26.5
SPG7-201ENST00000268704 LCA5LO95447 670 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 ARID5AQ03989 594 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 LRRC55Q6ZSA7 311 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 EFCAB13Q8IY85 973 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 LINC00116Q8NCU8 138 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 IFT81Q8WYA0 676 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 LARP4BQ92615 738 aaKnown RBP18.87■□□□□ 0.61
SPG7-201ENST00000268704 SRP68Q9UHB9 627 aaKnown RBP18.87■□□□□ 0.61
SPG7-201ENST00000268704 AHDC1Q5TGY3 1603 aaPredicted RBP18.87■□□□□ 0.61
SPG7-201ENST00000268704 KCNMA1Q12791 1236 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 HGSNATQ68CP4 663 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 RUFY1Q96T51 708 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 C6orf50Q9HD87 102 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 FAM169AQ9Y6X4 670 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 LDHBP07195 334 aaKnown RBP18.87■□□□□ 0.61
SPG7-201ENST00000268704 PAFAH1B1P43034 410 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 PDXDC1Q6P996 788 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 TBC1D7Q9P0N9 293 aa18.87■□□□□ 0.61
SPG7-201ENST00000268704 PRLRP16471 622 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 GUCY2FP51841 1108 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 ASTE1Q2TB18 679 aaPredicted RBP18.86■□□□□ 0.61
SPG7-201ENST00000268704 UNC13DQ70J99 1090 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 REXO1Q8N1G1 1221 aaKnown RBP18.86■□□□□ 0.61
SPG7-201ENST00000268704 KAT2BQ92831 832 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 CDK5RAP3Q96JB5 506 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 FGFBP2Q9BYJ0 223 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 FRMPD2Q68DX3 1309 aaPredicted RBP18.86■□□□□ 0.61
SPG7-201ENST00000268704 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 EBAG9O00559 213 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 TLR2O60603 784 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 CALCRLQ16602 461 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 COA7Q96BR5 231 aa18.86■□□□□ 0.61
SPG7-201ENST00000268704 CCDC43Q96MW1 224 aaKnown RBP18.86■□□□□ 0.61
SPG7-201ENST00000268704 GOLGA8KD6RF30 607 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 HSF2BPO75031 334 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 GUCY2DQ02846 1103 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 ITIH3Q06033 890 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 SEMA3FQ13275 785 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 PTPROQ16827 1216 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 DDX12PQ92771 950 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 NOX5Q96PH1 765 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 EPB41L5Q9HCM4 733 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 PALMO75781 387 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 ECM1Q16610 540 aa18.85■□□□□ 0.61
SPG7-201ENST00000268704 CLEC4GQ6UXB4 293 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms