RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 DNAAF3Q8N9W5 541 aa17.27■□□□□ 0.35
SHANK3-201ENST00000262795 ANKRD42Q8N9B4 389 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 SGK1O00141 431 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 TRAPPC10P48553 1259 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 CNGA4Q8IV77 575 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 PLCB1Q9NQ66 1216 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 CLCA2Q9UQC9 943 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 ACTN4O43707 911 aaKnown RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 TMEM62Q0P6H9 643 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 EZH2Q15910 746 aaKnown RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 BANK1Q8NDB2 785 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 SH3RF3Q8TEJ3 882 aaPredicted RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 ATP2A3Q93084 1043 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 DYRK4Q9NR20 520 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 SFI1A8K8P3 1242 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 H0YCG3 227 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 LRRN2O75325 713 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 ESRRBO95718 433 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 IGFBP4P22692 258 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 STAT1P42224 750 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 HABP4Q5JVS0 413 aaKnown RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 UHMK1Q8TAS1 419 aaKnown RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 SRPK1Q96SB4 655 aaKnown RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 ADCY8P40145 1251 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 IL6STP40189 918 aaPredicted RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 MECOMQ03112 1051 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 LRRC41Q15345 812 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 CYP26C1Q6V0L0 522 aa17.26■□□□□ 0.35
SHANK3-201ENST00000262795 JPH2Q9BR39 696 aaPredicted RBP17.26■□□□□ 0.35
SHANK3-201ENST00000262795 ABCB11O95342 1321 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 NNMTP40261 264 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 ARHGEF2Q92974 986 aaKnown RBP17.25■□□□□ 0.35
SHANK3-201ENST00000262795 SPATA33Q96N06 139 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 CYP27A1Q02318 531 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
SHANK3-201ENST00000262795 HSPH1Q92598 858 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 STMN2Q93045 179 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 HAUS1Q96CS2 278 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 SCG2P13521 617 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 KANSL2Q9H9L4 492 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 CUTAO60888 179 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 C6orf222P0C671 652 aaPredicted RBP17.25■□□□□ 0.35
SHANK3-201ENST00000262795 LMNB1P20700 586 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 ARL4DP49703 201 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 POLR2FP61218 127 aaKnown RBP17.25■□□□□ 0.35
SHANK3-201ENST00000262795 ZNF394Q53GI3 561 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 C8orf74Q6P047 294 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 NUF2Q9BZD4 464 aa17.25■□□□□ 0.35
SHANK3-201ENST00000262795 AFF4Q9UHB7 1163 aaKnown RBP17.25■□□□□ 0.35
SHANK3-201ENST00000262795 ZNF202O95125 648 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 LGSNQ5TDP6 509 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 LCA5Q86VQ0 697 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 RPGRIP1Q96KN7 1286 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 CNOT7Q9UIV1 285 aaKnown RBP17.24■□□□□ 0.35
SHANK3-201ENST00000262795 HOXC10Q9NYD6 342 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
SHANK3-201ENST00000262795 PPP1R2P41236 205 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 LARSQ9P2J5 1176 aaKnown RBP17.24■□□□□ 0.35
SHANK3-201ENST00000262795 ATP5DP30049 168 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 DEFB132Q7Z7B7 95 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
SHANK3-201ENST00000262795 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 EBAG9O00559 213 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 ADD1P35611 737 aaKnown RBP17.24■□□□□ 0.35
SHANK3-201ENST00000262795 GPSM2P81274 684 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 ADAM9Q13443 819 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 BRINP3Q76B58 766 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 SECISBP2LQ93073 1101 aaKnown RBP17.24■□□□□ 0.35
SHANK3-201ENST00000262795 PPP1R12CQ9BZL4 782 aa17.24■□□□□ 0.35
SHANK3-201ENST00000262795 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.23■□□□□ 0.35
SHANK3-201ENST00000262795 NAA35Q5VZE5 725 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 RSRC1Q96IZ7 334 aaKnown RBP17.23■□□□□ 0.35
SHANK3-201ENST00000262795 CCDC17Q96LX7 622 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 FRMD3A2A2Y4 597 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 USP17L5A8MUK1 530 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 TSPY1Q01534 308 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 SNX1Q13596 522 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 PI16Q6UXB8 463 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 SARS2Q9NP81 518 aaKnown RBP17.23■□□□□ 0.35
SHANK3-201ENST00000262795 PDE8BO95263 885 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 PPP2R3AQ06190 1150 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 SNX19Q92543 992 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 SLF1Q9BQI6 1058 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 COL4A3BPQ9Y5P4 624 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 TXNDC9O14530 226 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 TTC1Q99614 292 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 RSPH10B2B2RC85 870 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 RSPH10BP0C881 870 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 ERLEC1Q96DZ1 483 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 MSTO1Q9BUK6 570 aa17.23■□□□□ 0.35
SHANK3-201ENST00000262795 SSTR3P32745 418 aaPredicted RBP17.22■□□□□ 0.35
SHANK3-201ENST00000262795 CIITAP33076 1130 aa17.22■□□□□ 0.35
SHANK3-201ENST00000262795 STXBP2Q15833 593 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms