RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CUEDC2Q9H467 287 aa19.33■□□□□ 0.68
TRAM1-201ENST00000262213 GNAQP50148 359 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 NNTQ13423 1086 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 TBCKQ8TEA7 893 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 SH3RF3Q8TEJ3 882 aaPredicted RBP19.32■□□□□ 0.68
TRAM1-201ENST00000262213 CDK5RAP3Q96JB5 506 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 TMEM47Q9BQJ4 181 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 MYH1P12882 1939 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 LAD1O00515 517 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 PRPHP41219 470 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 MAN2A1Q16706 1144 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 PTPROQ16827 1216 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 USP17L2Q6R6M4 530 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 NOX5Q96PH1 765 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 SH3GL2Q99962 352 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 CASZ1Q86V15 1759 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 HEXIM1O94992 359 aaKnown RBP19.32■□□□□ 0.68
TRAM1-201ENST00000262213 DIXDC1Q155Q3 683 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 TRADDQ15628 312 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 SBK1Q52WX2 424 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 C12orf60Q5U649 245 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 KLHDC7AQ5VTJ3 777 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 CENPPQ6IPU0 288 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 EMBQ6PCB8 327 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 NEK8Q86SG6 692 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 AK8Q96MA6 479 aa19.32■□□□□ 0.68
TRAM1-201ENST00000262213 INPP5BP32019 993 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 CFAP58Q5T655 872 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 TMED8Q6PL24 325 aaPredicted RBP19.31■□□□□ 0.68
TRAM1-201ENST00000262213 SLC51AQ86UW1 340 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 TGFBRAP1Q8WUH2 860 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 FAM107BQ9H098 131 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 HNRNPH3P31942 346 aaKnown RBP19.31■□□□□ 0.68
TRAM1-201ENST00000262213 GUCY1A3Q02108 690 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 SOGA3Q5TF21 947 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 GBP6Q6ZN66 633 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 DAGLBQ8NCG7 672 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 KRT12Q99456 494 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRAM1-201ENST00000262213 CENPHQ9H3R5 247 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 MAGEF1Q9HAY2 307 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 TBC1D7Q9P0N9 293 aa19.31■□□□□ 0.68
TRAM1-201ENST00000262213 AHDC1Q5TGY3 1603 aaPredicted RBP19.3■□□□□ 0.68
TRAM1-201ENST00000262213 POTEMA6NI47 508 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 PALMO75781 387 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 GRB10Q13322 594 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 PDXDC1Q6P996 788 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 MAPKAPK5Q8IW41 473 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 BAP1Q92560 729 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 UBA5Q9GZZ9 404 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 PRLRP16471 622 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 CFAP221Q4G0U5 840 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 ALS2CLQ60I27 953 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 KRT25Q7Z3Z0 450 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 PHLPP1O60346 1717 aa19.3■□□□□ 0.68
TRAM1-201ENST00000262213 SSBP05455 408 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRAM1-201ENST00000262213 CCDC84Q86UT8 332 aaPredicted RBP19.29■□□□□ 0.68
TRAM1-201ENST00000262213 PROCA1Q8NCQ7 364 aaPredicted RBP19.29■□□□□ 0.68
TRAM1-201ENST00000262213 GJA10Q969M2 543 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 C6orf50Q9HD87 102 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 BLOC1S4Q9NUP1 217 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 ZNF652Q9Y2D9 606 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 EHHADHQ08426 723 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 MMS22LQ6ZRQ5 1243 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 ZNF572Q7Z3I7 529 aaPredicted RBP19.29■□□□□ 0.68
TRAM1-201ENST00000262213 KLHL7Q8IXQ5 586 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 IFT20Q8IY31 132 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 RNPC3Q96LT9 517 aaKnown RBP19.29■□□□□ 0.68
TRAM1-201ENST00000262213 NUDT12Q9BQG2 462 aa19.29■□□□□ 0.68
TRAM1-201ENST00000262213 CPP00450 1065 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 ITIH3Q06033 890 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 CCDC40Q4G0X9 1142 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 GALNT17Q6IS24 598 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 LARP4BQ92615 738 aaKnown RBP19.28■□□□□ 0.68
TRAM1-201ENST00000262213 PIGSQ96S52 555 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 ZMYND12Q9H0C1 365 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 CAPN7Q9Y6W3 813 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 PALM3A6NDB9 673 aaPredicted RBP19.28■□□□□ 0.68
TRAM1-201ENST00000262213 ZNF233A6NK53 670 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 POLR2FP61218 127 aaKnown RBP19.28■□□□□ 0.68
TRAM1-201ENST00000262213 RPS8P62241 208 aaKnown RBP19.28■□□□□ 0.68
TRAM1-201ENST00000262213 PNMA5Q96PV4 448 aa19.28■□□□□ 0.68
TRAM1-201ENST00000262213 LCA5LO95447 670 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 CALCRLQ16602 461 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 UNC13DQ70J99 1090 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 MAATS1Q7Z4T9 603 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 DNAAF5Q86Y56 855 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 CAVIN3Q969G5 261 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 LSM14BQ9BX40 385 aaKnown RBP19.27■□□□□ 0.68
TRAM1-201ENST00000262213 SEC63Q9UGP8 760 aaKnown RBP19.27■□□□□ 0.68
TRAM1-201ENST00000262213 MYH14Q7Z406 1995 aaKnown RBP19.27■□□□□ 0.68
TRAM1-201ENST00000262213 TRAF5O00463 557 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 TDP2O95551 362 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 PPP1R2P41236 205 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 IRX3P78415 501 aaPredicted RBP19.27■□□□□ 0.68
TRAM1-201ENST00000262213 KCNMA1Q12791 1236 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 RAPGEF1Q13905 1077 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 GRIK5Q16478 980 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 KCNK18Q7Z418 384 aa19.27■□□□□ 0.68
TRAM1-201ENST00000262213 NELFCDQ8IXH7 590 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms