RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 CALM3P0DP25 149 aa23.42■■□□□ 1.34
CFC1-201ENST00000259216 FUT2Q10981 343 aa23.42■■□□□ 1.34
CFC1-201ENST00000259216 DHX32Q7L7V1 743 aaKnown RBP23.42■■□□□ 1.34
CFC1-201ENST00000259216 FANCBQ8NB91 859 aa23.42■■□□□ 1.34
CFC1-201ENST00000259216 RRP36Q96EU6 259 aaKnown RBP23.42■■□□□ 1.34
CFC1-201ENST00000259216 NOC4LQ9BVI4 516 aaKnown RBP23.42■■□□□ 1.34
CFC1-201ENST00000259216 BRPF3Q9ULD4 1205 aa23.42■■□□□ 1.34
CFC1-201ENST00000259216 SLC12A7Q9Y666 1083 aa23.42■■□□□ 1.34
CFC1-201ENST00000259216 MEIS2O14770 477 aa23.41■■□□□ 1.34
CFC1-201ENST00000259216 TLR3O15455 904 aaKnown RBP23.41■■□□□ 1.34
CFC1-201ENST00000259216 KPNA6O60684 536 aa23.41■■□□□ 1.34
CFC1-201ENST00000259216 GH1P01241 217 aa23.41■■□□□ 1.34
CFC1-201ENST00000259216 MMP3P08254 477 aa23.41■■□□□ 1.34
CFC1-201ENST00000259216 Q7L0L9 218 aa23.41■■□□□ 1.34
CFC1-201ENST00000259216 VWCEQ96DN2 955 aa23.41■■□□□ 1.34
CFC1-201ENST00000259216 PPP1R12CQ9BZL4 782 aa23.41■■□□□ 1.34
CFC1-201ENST00000259216 PIK3CDO00329 1044 aa23.4■■□□□ 1.34
CFC1-201ENST00000259216 HOXD8P13378 290 aaPredicted RBP23.4■■□□□ 1.34
CFC1-201ENST00000259216 CSF2RAP15509 400 aa23.4■■□□□ 1.34
CFC1-201ENST00000259216 CYP2C18P33260 490 aa23.4■■□□□ 1.34
CFC1-201ENST00000259216 HSPA4P34932 840 aa23.4■■□□□ 1.34
CFC1-201ENST00000259216 MRPS9P82933 396 aaKnown RBP23.4■■□□□ 1.34
CFC1-201ENST00000259216 NBPF20Q3BBV1 942 aa23.4■■□□□ 1.34
CFC1-201ENST00000259216 FCHSD1Q86WN1 690 aa23.4■■□□□ 1.34
CFC1-201ENST00000259216 MICU3Q86XE3 530 aa23.4■■□□□ 1.34
CFC1-201ENST00000259216 KAT2BQ92831 832 aa23.4■■□□□ 1.34
CFC1-201ENST00000259216 TRMT13Q9NUP7 481 aaKnown RBP23.4■■□□□ 1.34
CFC1-201ENST00000259216 SP2Q02086 613 aa23.39■■□□□ 1.33
CFC1-201ENST00000259216 RASIP1Q5U651 963 aa23.39■■□□□ 1.33
CFC1-201ENST00000259216 FAM109BQ6ICB4 259 aaPredicted RBP23.39■■□□□ 1.33
CFC1-201ENST00000259216 PPP1R13LQ8WUF5 828 aa23.39■■□□□ 1.33
CFC1-201ENST00000259216 GPKOWQ92917 476 aaPredicted RBP eCLIP23.39■■□□□ 1.33
CFC1-201ENST00000259216 WNT8AQ9H1J5 351 aa23.39■■□□□ 1.33
CFC1-201ENST00000259216 HIPK3Q9H422 1215 aa23.39■■□□□ 1.33
CFC1-201ENST00000259216 FAM217BQ9NTX9 383 aaPredicted RBP23.39■■□□□ 1.33
CFC1-201ENST00000259216 MRVI1Q9Y6F6 885 aa23.39■■□□□ 1.33
CFC1-201ENST00000259216 CNTNAP5Q8WYK1 1306 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 hCG_1642624A0A1W2PR95 340 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 MYCLP12524 364 aaPredicted RBP23.38■■□□□ 1.33
CFC1-201ENST00000259216 KRT32Q14532 448 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 BRDTQ58F21 947 aaPredicted RBP23.38■■□□□ 1.33
CFC1-201ENST00000259216 TMEM240Q5SV17 173 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 NFRKBQ6P4R8 1299 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 USP17L6PQ6QN14 398 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 DEFB123Q8N688 67 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 ZFP91Q96JP5 570 aaPredicted RBP23.38■■□□□ 1.33
CFC1-201ENST00000259216 INPP4AQ96PE3 977 aaPredicted RBP23.38■■□□□ 1.33
CFC1-201ENST00000259216 CTAGE1Q96RT6 745 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.38■■□□□ 1.33
CFC1-201ENST00000259216 MTMR10Q9NXD2 777 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 SNX14Q9Y5W7 946 aa23.38■■□□□ 1.33
CFC1-201ENST00000259216 CPA1P15085 419 aa23.37■■□□□ 1.33
CFC1-201ENST00000259216 SEMA3FQ13275 785 aa23.37■■□□□ 1.33
CFC1-201ENST00000259216 RNPC3Q96LT9 517 aaKnown RBP23.37■■□□□ 1.33
CFC1-201ENST00000259216 SEC63Q9UGP8 760 aaKnown RBP23.37■■□□□ 1.33
CFC1-201ENST00000259216 UBA1P22314 1058 aaKnown RBP23.36■■□□□ 1.33
CFC1-201ENST00000259216 CCND2P30279 289 aa23.36■■□□□ 1.33
CFC1-201ENST00000259216 SMAD3P84022 425 aaKnown RBP23.36■■□□□ 1.33
CFC1-201ENST00000259216 PPIGQ13427 754 aaKnown RBP eCLIP23.36■■□□□ 1.33
CFC1-201ENST00000259216 MYSM1Q5VVJ2 828 aa23.36■■□□□ 1.33
CFC1-201ENST00000259216 PPTC7Q8NI37 304 aa23.36■■□□□ 1.33
CFC1-201ENST00000259216 TGFB3P10600 412 aa23.35■■□□□ 1.33
CFC1-201ENST00000259216 CYP2C9P11712 490 aa23.35■■□□□ 1.33
CFC1-201ENST00000259216 PTPN11Q06124 597 aaPredicted RBP23.35■■□□□ 1.33
CFC1-201ENST00000259216 LAMC2Q13753 1193 aa23.35■■□□□ 1.33
CFC1-201ENST00000259216 CELF3Q5SZQ8 465 aaKnown RBP23.35■■□□□ 1.33
CFC1-201ENST00000259216 TYW1BQ6NUM6 668 aa23.35■■□□□ 1.33
CFC1-201ENST00000259216 SESTD1Q86VW0 696 aa23.35■■□□□ 1.33
CFC1-201ENST00000259216 CCDC82Q8N4S0 544 aa23.35■■□□□ 1.33
CFC1-201ENST00000259216 TMEM199Q8N511 208 aa23.35■■□□□ 1.33
CFC1-201ENST00000259216 BCAS3Q9H6U6 928 aa23.35■■□□□ 1.33
CFC1-201ENST00000259216 HAS3O00219 553 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 F2P00734 622 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 NEFLP07196 543 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 HMGB1P09429 215 aaKnown RBP23.34■■□□□ 1.33
CFC1-201ENST00000259216 ICAM3P32942 547 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 RCAN1P53805 252 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 HSDL1Q3SXM5 330 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 KCNV1Q6PIU1 500 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 FBXL16Q8N461 479 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 AGXT2Q9BYV1 514 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 IL23AQ9NPF7 189 aa23.34■■□□□ 1.33
CFC1-201ENST00000259216 MYH7BA7E2Y1 1941 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 SPATA31C2B4DYI2 1134 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 ZBTB43O43298 467 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 GGPS1O95749 300 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 ACRP10323 421 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 CDC27P30260 824 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 DGKDQ16760 1214 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 RTN1Q16799 776 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 PCNX4Q63HM2 1172 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 ZNF365Q70YC5 407 aa23.33■■□□□ 1.33
CFC1-201ENST00000259216 RBM28Q9NW13 759 aaKnown RBP23.33■■□□□ 1.33
CFC1-201ENST00000259216 NID2Q14112 1375 aa23.32■■□□□ 1.32
CFC1-201ENST00000259216 KLF18A0A0U1RQI7 1052 aa23.32■■□□□ 1.32
CFC1-201ENST00000259216 STAM2O75886 525 aa23.32■■□□□ 1.32
CFC1-201ENST00000259216 SUPT20HL2P0C7V6 817 aa23.32■■□□□ 1.32
CFC1-201ENST00000259216 CASTP20810 708 aaKnown RBP23.32■■□□□ 1.32
CFC1-201ENST00000259216 CCL23P55773 120 aa23.32■■□□□ 1.32
CFC1-201ENST00000259216 FAM47CQ5HY64 1035 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms