RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 DLK2Q6UY11 383 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 MAEAQ7L5Y9 396 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 CTAGE1Q96RT6 745 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 DNM3Q9UQ16 869 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 LRRC37AA6NMS7 1700 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 CTNND1O60716 968 aaKnown RBP9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 TBCAO75347 108 aaKnown RBP9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 FCER1AP12319 257 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 NOVP48745 357 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 USP11P51784 963 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 USP14P54578 494 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 E2F4Q16254 413 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 TSG101Q99816 390 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 NUDT12Q9BQG2 462 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 KCNF1Q9H3M0 494 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 CUEDC2Q9H467 287 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 MEIS2O14770 477 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 CLSTN1O94985 981 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 SPAG1Q07617 926 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 PPP4R3AQ6IN85 833 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 IGSF22Q8N9C0 903 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 ZNF577Q9BSK1 485 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 TRIM9Q9C026 710 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 KDM3AQ9Y4C1 1321 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 MCTP2Q6DN12 878 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 GADL1Q6ZQY3 521 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 DDX12PQ92771 950 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 KCNJ18B7U540 433 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 WDR46O15213 610 aaKnown RBP9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 KCNJ12Q14500 433 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 CCDC40Q4G0X9 1142 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 KRT26Q7Z3Y9 468 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 CCDC65Q8IXS2 484 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 MTMR14Q8NCE2 650 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 ZNF280CQ8ND82 737 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 PAGR1Q9BTK6 254 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 TMX1Q9H3N1 280 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 GPRC5DQ9NZD1 345 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 STK17AQ9UEE5 414 aa9.71□□□□□ -0.85
CALCOCO2-201ENST00000258947 BICDL2A1A5D9 508 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 PLA2G4BP0C869 781 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 TNNT1P13805 278 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 VCAM1P19320 739 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 CDC25BP30305 580 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 SARSP49591 514 aaKnown RBP9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 ORC2Q13416 577 aaPredicted RBP9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 CTTNQ14247 550 aaKnown RBP9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 NAALADL2Q58DX5 795 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 ARHGEF16Q5VV41 709 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 C9orf131Q5VYM1 1079 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 SPECC1LQ69YQ0 1117 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 PIGOQ8TEQ8 1089 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 ATG4CQ96DT6 458 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 MTRQ99707 1265 aa9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.86
CALCOCO2-201ENST00000258947 FAM86B1E9PN63 330 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 NFIBO00712 420 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 TBC1D12O60347 775 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 FAM86B2P0C5J1 330 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 STK4Q13043 487 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 GRB10Q13322 594 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 PTPN14Q15678 1187 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 MCF2L2Q86YR7 1114 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 GPC2Q8N158 579 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 LPAR1Q92633 364 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 MAGEF1Q9HAY2 307 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 PANK4Q9NVE7 773 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 RGL1Q9NZL6 768 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 NRXN2Q9P2S2 1712 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 MYH8P13535 1937 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 FZD9O00144 591 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 TRAF5O00463 557 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 ZNF500O60304 480 aaPredicted RBP9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 PTGER2P43116 358 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 ZNF280AP59817 542 aaPredicted RBP9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 PDIA5Q14554 519 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 SNRNP48Q6IEG0 339 aaKnown RBP9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 SH3RF1Q7Z6J0 888 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 SCYL3Q8IZE3 742 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 RAD54LQ92698 747 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 ARID3AQ99856 593 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 BHMT2Q9H2M3 363 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 IMPACTQ9P2X3 320 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 MYMKA6NI61 221 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 PPP1R3GB7ZBB8 358 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 TEX33O43247 280 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 TRIM21P19474 475 aaKnown RBP9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 FKBP15Q5T1M5 1219 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 NT5DC1Q5TFE4 455 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 ELOA2Q8IYF1 753 aaPredicted RBP9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 KIAA1524Q8TCG1 905 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 HAS1Q92839 578 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 MTMR9Q96QG7 549 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 RWDD2AQ9UIY3 292 aa9.7□□□□□ -0.86
CALCOCO2-201ENST00000258947 NPHP3-ACAD11A0A0J9YXS1 232 aa9.69□□□□□ -0.86
CALCOCO2-201ENST00000258947 ADM5C9JUS6 153 aa9.69□□□□□ -0.86
CALCOCO2-201ENST00000258947 FAM13AO94988 1023 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms