RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PNMA2Q9UL42 364 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 IGLV3-22A0A075B6J6 115 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 IRF6O14896 467 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 TBX3O15119 743 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 POTEIP0CG38 1075 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 POTEJP0CG39 1038 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CUL4BQ13620 913 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 MCF2L2Q86YR7 1114 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 KBTBD4Q9NVX7 518 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 COL20A1Q9P218 1284 aa22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ZNF214Q9UL59 606 aaPredicted RBP22.14■■□□□ 1.14
TNFRSF1A-201ENST00000162749 GTPBP6O43824 516 aaPredicted RBP22.14■■□□□ 1.13
TNFRSF1A-201ENST00000162749 UBXN2AP68543 259 aa22.14■■□□□ 1.13
TNFRSF1A-201ENST00000162749 TTLL12Q14166 644 aaPredicted RBP22.14■■□□□ 1.13
TNFRSF1A-201ENST00000162749 CALML4Q96GE6 196 aa22.14■■□□□ 1.13
TNFRSF1A-201ENST00000162749 CUEDC2Q9H467 287 aa22.14■■□□□ 1.13
TNFRSF1A-201ENST00000162749 ZNF76P36508 570 aa22.13■■□□□ 1.13
TNFRSF1A-201ENST00000162749 PPATQ06203 517 aa22.13■■□□□ 1.13
TNFRSF1A-201ENST00000162749 GRB10Q13322 594 aa22.13■■□□□ 1.13
TNFRSF1A-201ENST00000162749 OTUD5Q96G74 571 aa22.13■■□□□ 1.13
TNFRSF1A-201ENST00000162749 NUDT12Q9BQG2 462 aa22.13■■□□□ 1.13
TNFRSF1A-201ENST00000162749 EHMT1Q9H9B1 1298 aa22.13■■□□□ 1.13
TNFRSF1A-201ENST00000162749 RIPK3Q9Y572 518 aa22.13■■□□□ 1.13
TNFRSF1A-201ENST00000162749 A0A0G2JMZ2 1700 aa22.13■■□□□ 1.13
TNFRSF1A-201ENST00000162749 OAZ1P54368 228 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 TREML2Q5T2D2 321 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 ERO1BQ86YB8 467 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SNX29Q8TEQ0 813 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 TRERF1Q96PN7 1200 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SPDYE5A6NIY4 337 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SPDYE16A6NNV3 312 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 MSH4O15457 936 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SPIRE1Q08AE8 756 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 KRT79Q5XKE5 535 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 MAGEF1Q9HAY2 307 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 MYPNQ86TC9 1320 aa22.12■■□□□ 1.13
TNFRSF1A-201ENST00000162749 RPS6P62753 249 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 TMEM132BQ14DG7 1078 aa22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 NCAPHQ15003 741 aa22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 PNMA5Q96PV4 448 aa22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 HOXC10Q9NYD6 342 aa22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 MAP3K20Q9NYL2 800 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SNRNP48Q6IEG0 339 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 MLKLQ8NB16 471 aa22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 FAM20AQ96MK3 541 aa22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 RPTORQ8N122 1335 aa22.11■■□□□ 1.13
TNFRSF1A-201ENST00000162749 A0A0G2JLL6 359 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 ATP2A1O14983 1001 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 MYL1P05976 194 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 PRRT2Q7Z6L0 340 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SYTL5Q8TDW5 730 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 RNF146Q9NTX7 359 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 BLOC1S4Q9NUP1 217 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 CLEC11AQ9Y240 323 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 IKBKBO14920 756 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 CEP55Q53EZ4 464 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 MAP1SQ66K74 1059 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SAMD3Q8N6K7 520 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SPC24Q8NBT2 197 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 CDK5RAP3Q96JB5 506 aa22.1■■□□□ 1.13
TNFRSF1A-201ENST00000162749 ECM1Q16610 540 aa22.09■■□□□ 1.13
TNFRSF1A-201ENST00000162749 SLC30A10Q6XR72 485 aa22.09■■□□□ 1.13
TNFRSF1A-201ENST00000162749 TEX13BQ9BXU2 312 aa22.09■■□□□ 1.13
TNFRSF1A-201ENST00000162749 STK17AQ9UEE5 414 aa22.09■■□□□ 1.13
TNFRSF1A-201ENST00000162749 LCTP09848 1927 aa22.09■■□□□ 1.13
TNFRSF1A-201ENST00000162749 KIAA1217Q5T5P2 1943 aa22.09■■□□□ 1.13
TNFRSF1A-201ENST00000162749 STAT3P40763 770 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 TMEM119Q4V9L6 283 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 ARMC9Q7Z3E5 817 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 PROCA1Q8NCQ7 364 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 KCNF1Q9H3M0 494 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 RABGAP1Q9Y3P9 1069 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 RPN1P04843 607 aaKnown RBP22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 RNF207Q6ZRF8 634 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 IL31RAQ8NI17 732 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 ZFP91Q96JP5 570 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 DACH1Q9UI36 760 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 VAV3Q9UKW4 847 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 KCNH4Q9UQ05 1017 aa22.08■■□□□ 1.13
TNFRSF1A-201ENST00000162749 FRMPD4Q14CM0 1322 aa22.08■■□□□ 1.12
TNFRSF1A-201ENST00000162749 SMTNL1A8MU46 457 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TRAF5O00463 557 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 CXCL11O14625 94 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MYL5Q02045 173 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PPIL2Q13356 520 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 HYIQ5T013 277 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 SARM1Q6SZW1 724 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 NSMFQ6X4W1 530 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 GADL1Q6ZQY3 521 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PLA2G4DQ86XP0 818 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 LARP4BQ92615 738 aaKnown RBP22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 OPTNQ96CV9 577 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TRIM9Q9C026 710 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 HSD3B7Q9H2F3 369 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MEIS1O00470 390 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 HOXA7P31268 230 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 FMR1Q06787 632 aaKnown RBP eCLIP22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 LDLRAD1Q5T700 205 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 POTEEQ6S8J3 1075 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms