RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Spata31d1bE9QA57 1361 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Zswim8Q3UHH1 1832 aaKnown RBP7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 AK157302I3ITR1 129 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Hspa8P63017 646 aaKnown RBP7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Chrna5Q2MKA5 467 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Mphosph8Q3TYA6 858 aaKnown RBP7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Gas2l3Q3UWW6 683 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Lrrc42Q8R2U7 421 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Rabep2Q91WG2 554 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Mrps5Q99N87 432 aaKnown RBP7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Isca1Q9D924 129 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 IgtpQ9DCE9 423 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Fam47eD3YWC7 402 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Gm340F6RGI3 1242 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Ccdc157Q5SPX1 718 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Naa35Q6PHQ8 725 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Gpr101Q80T62 511 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Sec24bQ80ZX0 1251 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Clca2Q8BG22 942 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Vipas39Q8BGQ1 491 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Ugp2Q91ZJ5 508 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Tmem53Q9D0Z3 276 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Tacc3Q9JJ11 631 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 NbnQ9R207 751 aa7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Psma5Q9Z2U1 241 aaKnown RBP7.83□□□□□ -1.16
Chm-202ENSMUST00000113388 Mybbp1aQ7TPV4 1344 aaKnown RBP7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Zfp850J3QPC5 689 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Grm8P47743 908 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Serpinb6dQ3UWK8 375 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Clec4a4Q5YIR8 236 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Znf148Q61624 794 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Tekt3Q6X6Z7 490 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Serpina3fQ80X76 445 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Enox1Q8BHR2 643 aaKnown RBP7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Rmdn2Q8BSE0 410 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Ppm1mQ8BU27 406 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Lin7aQ8JZS0 233 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Arhgef6Q8K4I3 771 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Aldh1l1Q8R0Y6 902 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 LratQ9JI60 231 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Cib2Q9Z309 187 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Nhsl2B1AXH1 854 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Olfr310B2RVZ1 332 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Ddx23D3Z0M9 819 aaKnown RBP7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Nedd4P46935 887 aaKnown RBP7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Cct7P80313 544 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Glg1Q61543 1175 aaKnown RBP7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Dnajc6Q80TZ3 938 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Pde6cQ91ZQ1 861 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Yeats4Q9CR11 227 aaKnown RBP7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Ppfia1B2RXQ2 1266 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Enc1O35709 589 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 S100bP50114 92 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Q14AM7 275 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Klra6Q60653 266 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 TdrkhQ80VL1 560 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Acad11Q80XL6 779 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 TbcdQ8BYA0 1196 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Tshz3Q8CGV9 1081 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Gatad2aQ8CHY6 629 aaKnown RBP7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Ivns1abpQ920Q8 642 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Emc3Q99KI3 261 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Trpd52l3Q9CQ14 231 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Ddx28Q9CWT6 540 aaKnown RBP7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Tmem191cQ9JJB1 302 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Slc8a3S4R2P9 928 aa7.82□□□□□ -1.16
Chm-202ENSMUST00000113388 Zkscan16A2ALW2 728 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Kansl3A2RSY1 903 aaKnown RBP7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Etnk2A7MCT6 385 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Cylc2B1AWN8 422 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Ccdc175E9PVB3 822 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 CenpaO35216 134 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Map3k7Q62073 579 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Atxn2lQ7TQH0 1049 aaKnown RBP7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Exoc1Q8R3S6 894 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Nphp1Q9QY53 687 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Kank3Q9Z1P7 791 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Dlg5E9Q9R9 1921 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Gm28919A0A087WP35 240 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Card9A2AIV8 536 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Gm3264L7N2C5 238 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Stag2O35638 1231 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Pdia3P27773 505 aaKnown RBP7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Gjc1P28229 396 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Rgl1Q60695 768 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Pdzph1Q8BGR1 1238 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Smndc1Q8BGT7 238 aaKnown RBP7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 FtoQ8BGW1 502 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Tmem259Q8CIV2 574 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Ubac1Q8VDI7 409 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Cdhr1Q8VHP6 859 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Tlcd1Q99JT6 247 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Ndufb5Q9CQH3 189 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 ZwintQ9CQU5 252 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Fmnl1Q9JL26 1094 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Pkd2l2Q9JLG4 621 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Krt27Q9Z320 448 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Sh3tc1G3X9F6 1346 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Ift81O35594 676 aa7.81□□□□□ -1.16
Chm-202ENSMUST00000113388 Eef1bO70251 225 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms