RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 CD99L2Q8TCZ2 262 aa14.74□□□□□ -0.05
PHGDH-220ENST00000641570 OXER1Q8TDS5 423 aa14.74□□□□□ -0.05
PHGDH-220ENST00000641570 IWS1Q96ST2 819 aa14.74□□□□□ -0.05
PHGDH-220ENST00000641570 WBP1LQ9NX94 342 aa14.74□□□□□ -0.05
PHGDH-220ENST00000641570 TSKSQ9UJT2 592 aa14.74□□□□□ -0.05
PHGDH-220ENST00000641570 CFAP45Q9UL16 551 aa14.74□□□□□ -0.05
PHGDH-220ENST00000641570 BAZ2BQ9UIF8 2168 aaKnown RBP14.74□□□□□ -0.05
PHGDH-220ENST00000641570 MYH6P13533 1939 aa14.74□□□□□ -0.05
PHGDH-220ENST00000641570 LOC102724159A0A0B4J2E5 919 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 GOLGA6L22H0YM25 854 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 STAM2O75886 525 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 BRD1O95696 1058 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 GCFC2P16383 781 aaKnown RBP14.73□□□□□ -0.05
PHGDH-220ENST00000641570 U2AF2P26368 475 aaKnown RBP eCLIP14.73□□□□□ -0.054e-10■■□□□ 11.5
PHGDH-220ENST00000641570 KRT85P78386 507 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 ARHGAP4P98171 946 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 SETQ01105 290 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-220ENST00000641570 PWP2Q15269 919 aaKnown RBP14.73□□□□□ -0.05
PHGDH-220ENST00000641570 SF3A1Q15459 793 aaKnown RBP14.73□□□□□ -0.05
PHGDH-220ENST00000641570 STXBP2Q15833 593 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 NOM1Q5C9Z4 860 aaKnown RBP14.73□□□□□ -0.05
PHGDH-220ENST00000641570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.73□□□□□ -0.05
PHGDH-220ENST00000641570 GBP4Q96PP9 640 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 PXMP2Q9NR77 195 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 CNPY2Q9Y2B0 182 aa14.73□□□□□ -0.05
PHGDH-220ENST00000641570 BAG4O95429 457 aaKnown RBP14.72□□□□□ -0.05
PHGDH-220ENST00000641570 CYP2B6P20813 491 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 SREBF1P36956 1147 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 CTCFP49711 727 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-220ENST00000641570 CLK2P49760 499 aaKnown RBP14.72□□□□□ -0.05
PHGDH-220ENST00000641570 ALDH5A1P51649 535 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-220ENST00000641570 PRMT2P55345 433 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 UBXN2AP68543 259 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 GHRHRQ02643 423 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 TTC38Q5R3I4 469 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 MYSM1Q5VVJ2 828 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 MFSD14CQ5VZR4 134 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 ATL3Q6DD88 541 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 JMYQ8N9B5 988 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 ZNF296Q8WUU4 475 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-220ENST00000641570 CDHR1Q96JP9 859 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 TAAR1Q96RJ0 339 aa14.72□□□□□ -0.05
PHGDH-220ENST00000641570 DIS3Q9Y2L1 958 aaKnown RBP14.72□□□□□ -0.05
PHGDH-220ENST00000641570 KIF28PB7ZC32 967 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 OPLAHO14841 1288 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 USP11P51784 963 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 RESTQ13127 1097 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 ORC2Q13416 577 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-220ENST00000641570 PGM5Q15124 567 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 STK38Q15208 465 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 PCNX4Q63HM2 1172 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 POTEEQ6S8J3 1075 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 MSL3Q8N5Y2 521 aaKnown RBP14.71□□□□□ -0.05
PHGDH-220ENST00000641570 TBC1D5Q92609 795 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 TRIM47Q96LD4 638 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 R3HDMLQ9H3Y0 253 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 DDX25Q9UHL0 483 aaKnown RBP14.71□□□□□ -0.05
PHGDH-220ENST00000641570 TRIM17Q9Y577 477 aa14.71□□□□□ -0.05
PHGDH-220ENST00000641570 PARP14Q460N5 1801 aa14.71□□□□□ -0.06
PHGDH-220ENST00000641570 GOLGA6L4A6NEF3 574 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 NEMFO60524 1076 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 NR3C2P08235 984 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 MCM7P33993 719 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 CNTN2Q02246 1040 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 PKP1Q13835 747 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 TMEM266Q2M3C6 531 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-220ENST00000641570 DNAJC5GQ8N7S2 189 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 FAM133AQ8N9E0 248 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 PDCD2LQ9BRP1 358 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 RAB34Q9BZG1 259 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 COL11A1P12107 1806 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-220ENST00000641570 RLFQ13129 1914 aa14.7□□□□□ -0.06
PHGDH-220ENST00000641570 EIF3JO75822 258 aaKnown RBP14.69□□□□□ -0.06
PHGDH-220ENST00000641570 HSPA1AP0DMV8 641 aaKnown RBP14.69□□□□□ -0.06
PHGDH-220ENST00000641570 HSPA1BP0DMV9 641 aaKnown RBP14.69□□□□□ -0.06
PHGDH-220ENST00000641570 FLT3LGP49771 235 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 CEBPZQ03701 1054 aaKnown RBP14.69□□□□□ -0.06
PHGDH-220ENST00000641570 PRKCZQ05513 592 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 MTMR1Q13613 665 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 NPY5RQ15761 445 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 CALCRLQ16602 461 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 PRR16Q569H4 304 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 MORN1Q5T089 497 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 ARHGAP39Q9C0H5 1083 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 SRRDQ9UH36 339 aa14.69□□□□□ -0.06
PHGDH-220ENST00000641570 ZHX1Q9UKY1 873 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-220ENST00000641570 SYNGAP1Q96PV0 1343 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 RBBP6Q7Z6E9 1792 aaKnown RBP14.68□□□□□ -0.06
PHGDH-220ENST00000641570 M0R2N6 131 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 ZNF174Q15697 407 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 ZNF792Q3KQV3 632 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 CEP55Q53EZ4 464 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 KCNV1Q6PIU1 500 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 MOXD1Q6UVY6 613 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 ARMCX2Q7L311 632 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 PLA2G4DQ86XP0 818 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 TNFRSF25Q93038 417 aa14.68□□□□□ -0.06
PHGDH-220ENST00000641570 MAML3Q96JK9 1138 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms