RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 NPFFR2Q9Y5X5 522 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 TCAF2A6NFQ2 919 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 CCDC85CA6NKD9 419 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 MYO1BO43795 1136 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 DLX3O60479 287 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 C1QTNF9P0C862 333 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 IFRD2Q12894 506 aaPredicted RBP7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 WWC2Q6AWC2 1192 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 DENND5AQ6IQ26 1287 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 TMC6Q7Z403 805 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 DPF3Q92784 378 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 DRC1Q96MC2 740 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 CNTD2Q9H8S5 307 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 SNTG2Q9NY99 539 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 FBLN5Q9UBX5 448 aa7.78□□□□□ -1.16
SCAMP1-205ENST00000614488 BTBD11A6QL63 1104 aa7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 ARNTLO00327 626 aa7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 PABPC1P11940 636 aaKnown RBP7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 SSRP1Q08945 709 aaKnown RBP7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 ATG14Q6ZNE5 492 aa7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 PMFBP1Q8TBY8 1022 aa7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 PLEKHO2Q8TD55 490 aa7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 UBXN4Q92575 508 aa7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 MARCH2Q9P0N8 246 aa7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 NUDT5Q9UKK9 219 aa7.77□□□□□ -1.17
SCAMP1-205ENST00000614488 DBX1A6NMT0 343 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 PRODHO43272 600 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 ADCY3O60266 1144 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 FUCA1P04066 466 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 RSPO2Q6UXX9 243 aaPredicted RBP7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 NSMFQ6X4W1 530 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 ANKLE2Q86XL3 938 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 RCBTB1Q8NDN9 531 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 USP33Q8TEY7 942 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 OSBP2Q969R2 916 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 TSPAN17Q96FV3 270 aa7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 DNAJC2Q99543 621 aaKnown RBP7.76□□□□□ -1.17
SCAMP1-205ENST00000614488 ZC3H12DA2A288 527 aaKnown RBP7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 F8W031 263 aaPredicted RBP7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 N4BP3O15049 544 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 CDR1P51861 262 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 LONRF2Q1L5Z9 754 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 DCP2Q8IU60 420 aaKnown RBP7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 RIOX2Q8IUF8 465 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 CILP2Q8IUL8 1156 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 PEX11GQ96HA9 241 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 SRPK1Q96SB4 655 aaKnown RBP7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 SGPP1Q9BX95 441 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 OSBPL2Q9H1P3 480 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 GPR27Q9NS67 375 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 PFDN2Q9UHV9 154 aa7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 DBR1Q9UK59 544 aaKnown RBP7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 SMG5Q9UPR3 1016 aaKnown RBP7.75□□□□□ -1.17
SCAMP1-205ENST00000614488 FAM221BA6H8Z2 402 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 SLC9A5Q14940 896 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 KCNA10Q16322 511 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 MROH9Q5TGP6 573 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 USP53Q70EK8 1073 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 NLRP10Q86W26 655 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 LDHDQ86WU2 507 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 TEX2Q8IWB9 1127 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 ZBTB38Q8NAP3 1195 aaPredicted RBP7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 MZB1Q8WU39 189 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 DCAF4Q8WV16 495 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 TOX2Q96NM4 488 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 X6R8D5 127 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 IRS2Q9Y4H2 1338 aa7.74□□□□□ -1.17
SCAMP1-205ENST00000614488 C22orf46C9J442 243 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 H7BY64 318 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 ZBTB7AO95365 584 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 NTRK1P04629 796 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 LCP1P13796 627 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 FBLN1P23142 703 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 BCL6P41182 706 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 SLC6A11P48066 632 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 LINC00310P59036 64 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 PRR5P85299 388 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 LSAMPQ13449 338 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 ZC3H12BQ5HYM0 836 aaKnown RBP7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 YOD1Q5VVQ6 348 aaPredicted RBP7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 DPH6Q7L8W6 267 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 SIGLEC10Q96LC7 697 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 ZFYVE21Q9BQ24 234 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 BTG4Q9NY30 223 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 PCDHA5Q9Y5H7 936 aa7.73□□□□□ -1.17
SCAMP1-205ENST00000614488 NPIPB6E9PJ23 425 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 IRS4O14654 1257 aaPredicted RBP7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 FPR2P25090 351 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 EPHB3P54753 998 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 ZNF200P98182 395 aaPredicted RBP7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 NFE2L2Q16236 605 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 NTRK3Q16288 839 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 CEP68Q76N32 757 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 SCUBE1Q8IWY4 988 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 TRMT2BQ96GJ1 504 aaKnown RBP7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 TMEM169Q96HH4 297 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 PHF20Q9BVI0 1012 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 RNF38Q9H0F5 515 aa7.72□□□□□ -1.17
SCAMP1-205ENST00000614488 AP5M1Q9H0R1 490 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms